| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3487 |
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| Symbol | |
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| ID | 7388760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2884484 |
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| End bp | 2885482 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652328 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550511 |
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| Protein GI | 222149554 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA TTGAAAATCA ATGCGAAAAG CCCGTTCTGC GAAGAGTTGG TACTCTGTCC
GTTGTGGCGA TTGCGACACT CGTTTCCCTT CTGACGCTTT CCACTGGGTC CGCATCGGCA
GCTGGTTGCG GTCAGCCCAG GGATGTGGGT CGTTATGATA TGACACTGAC CTCTGGCGGA
CATGAGCGGG TGTTTTCCTA TTTCATTCCC TCCAGCTATA GCAGCCAGGA CAAGGTGCCG
GTCGTGTTCG ATTTCCACGG GTCCGACAGC AATGCCAATG AGCAACTGGA CCGGAGCGAA
TGGGAGCGGG TGGCTGAGCG CGAAGGCTTT ATCGCTGTCG CGCCGCAAGG GTCGATGCCC
ACCAAGCGGG CGGGCTATTT CGCCTGGAAT GTGCCGGGCG TCGCCAAAGG CGAGGCCGAT
GAGGAAGCCT ATATCCGCGA TGTGATCAAG GCTGTCGAAG ACAATTTCTG TGTTGATCCG
GCGCGCTTCT ACGCCACCGG CTATTCCGGC GGCGGACGGA TGGTGTCGCA ATATCTTTGC
GATGGAAACA CCGATTTTGC CGCTGCCGGT CTGGTGGTCG GCCTGCGGGC CGGGGCGCCG
AAGCGTGAAG GCGATGGTTT CGTGCCGGAT GCTGCGACCT GCAAACCCGC AAAACCGATG
TCGCTGATTG CCTTTGCCGG GCTGGACGAC AAGATCAACC CAATCGCCGG GCAGGGCCTG
CCCTATTGGG GCTACGGCGC CGATGCCGCA CTGCATCGCT GGGCGGAGTT GGACGGGTGC
AAATCTCCCA CAGTGAAAAC CGAGGGCCGG GTCGAGACCA CCGAGTATGC TCAATGCTCG
GACGGTGCGC GCATTGCCTC CTACCGTTTG GCGGGGGCGG GCCATACATG GCCGGGCAGC
ACTGCATCAC TGAAGATCCA GAAGGTGATC GGCAAGGTCT CCTTCGACCT GAATGCCACG
GATATGATGT GGGATTTCTT CTCGAAATCG AAGCGTTGA
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| Protein sequence | MQNIENQCEK PVLRRVGTLS VVAIATLVSL LTLSTGSASA AGCGQPRDVG RYDMTLTSGG
HERVFSYFIP SSYSSQDKVP VVFDFHGSDS NANEQLDRSE WERVAEREGF IAVAPQGSMP
TKRAGYFAWN VPGVAKGEAD EEAYIRDVIK AVEDNFCVDP ARFYATGYSG GGRMVSQYLC
DGNTDFAAAG LVVGLRAGAP KREGDGFVPD AATCKPAKPM SLIAFAGLDD KINPIAGQGL
PYWGYGADAA LHRWAELDGC KSPTVKTEGR VETTEYAQCS DGARIASYRL AGAGHTWPGS
TASLKIQKVI GKVSFDLNAT DMMWDFFSKS KR
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