Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3469 |
Symbol | ureF |
ID | 7387069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2874136 |
End bp | 2874828 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643652315 |
Product | urease accessory protein |
Protein accession | YP_002550498 |
Protein GI | 222149541 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTG CTCTCGACAC GCTCGGCCTG ATCCGGCTGA TGACATGGCT CTCGCCGGCC TTTCCTGTGG GTGGCTTTGC CTATTCCGGT GGACTGGAAA AGGCGGTCGA GGATGGATTG ATTGATGGTG GCGGGACCGC GACCGGGCGG CAAGAGGCGT TGCTGGCCTG GCTGACATCG CTGCTGGACC ATGGCACAAT TTGGAACGAT GCGGTGCTTC TGGCTGAGGC CTGGCGGGTT TGGAATGTGC CGCAGTCCCT AACCGAGGTG TCGGATCTGG CGCTGGCGCT GGCCGGCTCT CGGGAGCGCT ATCAGGAAAC GACGGCGCTC GGCGCGGCGT TTCGTGAAGC GGCCCGCGCC TGGGCGGACC CGCTTTCGGC TCTGTCGCCC AATCCAGTCG CCTATCCGGT GGCGGTTGGG GCGGTCGGCG CCAGTCAGGG GATAGGTTGC GAGGCAGTGC TTGCCGCCTA TTTGCATGCG GCCCTGTCGC AGCAGGTCTC GGCGGGTATT CGCCTCAGCC TGATCGGCCA GACCGGTGGC CTCGCCATTC TGTCGCGGCT TGAGGCGCCT GTGGCAAGAT TGGCTGCCCG TGCCGTTCAG ACGGGGTTGG ACGATCTTGG CAGCGCGACG ATTGCCGCAG ACATCGTTTC GGCGCGCCAC GAAGGTCAAT CTGTGCGACT GTTCCGGTCG TGA
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Protein sequence | MTIALDTLGL IRLMTWLSPA FPVGGFAYSG GLEKAVEDGL IDGGGTATGR QEALLAWLTS LLDHGTIWND AVLLAEAWRV WNVPQSLTEV SDLALALAGS RERYQETTAL GAAFREAARA WADPLSALSP NPVAYPVAVG AVGASQGIGC EAVLAAYLHA ALSQQVSAGI RLSLIGQTGG LAILSRLEAP VARLAARAVQ TGLDDLGSAT IAADIVSARH EGQSVRLFRS
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