| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3445 |
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| Symbol | |
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| ID | 7387050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2848953 |
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| End bp | 2849318 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643652296 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550479 |
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| Protein GI | 222149522 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2363] Uncharacterized small membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.104865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTGC GCGCATTGAG ACCTCTCCTG CTAATCTTGT CCGGCCTGTT CGGCGCCTGC
GGCGTCGGGC TGGCGGCAGC GGCGGCGCAT GTGACGGGAG CTGGCAATCT GCTTGGCCCC
GCCTCCTCGA TTGCGCTCAC CCATGCCCCC GCCTTGCTGG GGCTTTATCT GGCCGGTGAC
AGGATTCGCA CCGCCACGCT ATCCGGCCTG ATGATCGGCC TCGGCGTGCT GCTTTTTGCC
GGTGATCTCA CGGTCAAGCA ATGGACCGGC CAGAGCCTGT TTCCTATGGC CGCCCCAACG
GGCGGTATTG CGATGATGGT CGGTTGGGCG CTGTTGGCGC TCGGCGCATT TTTGCCGCGC
AGCTGA
|
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| Protein sequence | MSLRALRPLL LILSGLFGAC GVGLAAAAAH VTGAGNLLGP ASSIALTHAP ALLGLYLAGD
RIRTATLSGL MIGLGVLLFA GDLTVKQWTG QSLFPMAAPT GGIAMMVGWA LLALGAFLPR
S
|
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