| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3412 |
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| Symbol | |
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| ID | 7387028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2826262 |
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| End bp | 2827248 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643652273 |
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| Product | PEP phosphonomutase protein |
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| Protein accession | YP_002550457 |
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| Protein GI | 222149500 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02320] phosphoenolpyruvate phosphomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.315477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG CAACAAACTC CCTTTACGTC GACAACCTTA CACGCGGTAC TGCGCTCCGG
GGCCTTATCC ATCGCTCTGA ATTGACCTTT CTGATGGAAG CCCACAGCGG CTTGTCCGCG
AAGATCGTTG AGGAAGCGGG ATTCGACGGT ATCTGGGCAT CCGGGTTATC GATCTCAGCA
ATGTTGGGCC TGAGAGACAA TAATGAGGCG TCGTGGACAC AAGTCCTCGA CGTCTTGGAG
TACATGGCCG ATTCCGCGTC TATTCCAATC CTTGTTGACG GCGATACCGG ATATGGGAAT
TTCAACAATG CTCGGCGCTT CGTACGAAAA CTGTGCGACA GAGGGCTGGC TGGCGTGTGC
TTCGAGGACA AGTTGTTTCC AAAGACAAAT TCGTTCATCG GAGAGGCACA ACCTCTCGCC
GAAATTGGCG AATTCTCCGG TCGAATTAAA GCGGCGCTCG ATGCTCGAAA CGACGACGGA
TTTTGTGTCA TAGCCAGGGT TGAAGCCCTG ATCGCCGGTC ATGGCATGAT GGAGGCGATG
CGCCGTGCCG AAGCGTACCA CCAAGCCGGC GCCGACGCGA TTTTGATTCA CTCGAAAAAA
GATGACGCCG GCGAAATCGT CGAGTTCTCC AGGCTTTGGG CTAATCGGTG CCCGCTTGTG
ATCGTGCCCA CCAAATATTA TCGCACGCCG ACCCAGACGT TCAAGGACGC CGGCATTTCC
ACTGTGATCT GGGCGAACCA TTTGATCCGT TCATCTATCA CGGCCATGGC AGACACAGCT
AGAAAAATCC AGGCCGAGCA GTGCCTTGTC AATGTTGAAG GCGGTATTGC AACCGTCGAT
GAGATTTTCC GTCTAACCAA ACAAGATGAG CTTTCAGCAG CCGAAAGCAA GTACCTGCCG
CCAATGACGG GACTTGTGCC ATGCATAGGT TGCTCCGGCC AATTAACTGG GCAGGAAATG
CCATGCTCAT CAAATTGCAA GCTTTAG
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| Protein sequence | MNIATNSLYV DNLTRGTALR GLIHRSELTF LMEAHSGLSA KIVEEAGFDG IWASGLSISA
MLGLRDNNEA SWTQVLDVLE YMADSASIPI LVDGDTGYGN FNNARRFVRK LCDRGLAGVC
FEDKLFPKTN SFIGEAQPLA EIGEFSGRIK AALDARNDDG FCVIARVEAL IAGHGMMEAM
RRAEAYHQAG ADAILIHSKK DDAGEIVEFS RLWANRCPLV IVPTKYYRTP TQTFKDAGIS
TVIWANHLIR SSITAMADTA RKIQAEQCLV NVEGGIATVD EIFRLTKQDE LSAAESKYLP
PMTGLVPCIG CSGQLTGQEM PCSSNCKL
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