Gene Avi_3356 details

Gene Information

• Locus tag: Avi_3356
• ID: 7387504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2776819
• End bp: 2777526
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643652232
• Product: hypothetical protein
• Protein accession: YP_002550416
• Protein GI: 222149459

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATATT CAATTTGCTA TACACCCTCT GCGCGTGACC CGCTGTCGCT TGCAGCCGCC 
AGCTGGCTGG GACGCAATGT CTATTCCGAT GAGCCGGTCG AACATCCGGG GCTGGCAGGG 
CTTGGCCTGC ACGAGATTGC CTTTCATACG GCCTTGCCGC GTCGAAATGG GTTCCATGGC 
TGCCTGAAAG CGCCGTTTGC CTTACATCCT GAGGTCAGCG AAGCCCAGTT GCTGCGTGAA 
CTGATGCATT TCGCCGGCAT TGTCGAACCT TTCGCACTGC CGGGACTGGA AGTGGCGAAG 
CTCGGTGATT TCTGCGGTCT GACTTTGACA CATCCGTCCA ACCAGTTAGA CCGGGTGGCG 
GCGCTGGTGG TACAGAATTT CGACCGGTTC CGCGCGCCGC TCAGCGATGC CGAAATTGAA 
CGCATGGCGC CCGAACGGCT CAGCGCGCCG CAATTTGCCA ATCTTTACCG CTGGGGCGAT 
CCGCATGTGC TGGACGAATA CCGTTTCTAC ATGCCCTTGA CCGGGCCTTT GCCGCTCAGC 
CACCGCGATC GCCTGCATCA GGCGGCGACT CACTATTTCG CGCCGCTGCT GCAAAACCCT 
GTCGTGTTTG CCAATCTGGC GCTGTTTATC GAGCGTGAGC CGGGTGCGCC ACTGGTGGTG 
CATTCACTGC ATCCGATGGG GCGGGTCTCG GCGCGCAAGA TCGCCTGA 

 

Protein sequence

MRYSICYTPS ARDPLSLAAA SWLGRNVYSD EPVEHPGLAG LGLHEIAFHT ALPRRNGFHG 
CLKAPFALHP EVSEAQLLRE LMHFAGIVEP FALPGLEVAK LGDFCGLTLT HPSNQLDRVA 
ALVVQNFDRF RAPLSDAEIE RMAPERLSAP QFANLYRWGD PHVLDEYRFY MPLTGPLPLS 
HRDRLHQAAT HYFAPLLQNP VVFANLALFI EREPGAPLVV HSLHPMGRVS ARKIA