Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3342 |
Symbol | |
ID | 7387494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2763434 |
End bp | 2767438 |
Gene Length | 4005 bp |
Protein Length | 1334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652222 |
Product | peptide synthetase |
Protein accession | YP_002550406 |
Protein GI | 222149449 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTG TAGGCAGACA TGAGCAGGTT TTTCCGGTTT CTCTTGCGCA GGCAGGCTTG TGGGTCAAAC AAAAGGTAGC TCCCGCCGAT CTGAGCTTTG TCCTTGCTGA ATCCATCGAA ATTCACGGTC CCGTTCATCC AGGACTGTTC TGCCAGGCGT TGCGCCGCTT GTCAGATGAT GTTGCTGTCA CACGGTCTCG CATCAAGGAA ATCGAAGGGC AGCCGCATCA GGTTGTCATG GCGGCCTATT GCGGCGTCTT TGACGTGATC GATTTCAGCG GTGCTGACAA TCCTGGCGCA AGCGCCATGG ACTGGATGCG CAAGCAGATG TCTAAGCCGC TCGATCTTGC CAATGACAAT CTCTGGGGGT CTTCACTTTT GAAGCTCGGG GCCACAGAAT GGGTCTGGTA TCATTGGGCA CATCATATCA TCATGGATGG GTTTTCTGGC GGCTTGCTGG CCCGGCGGCT GGCCGATATT TATTCGGCGC TGGCCCAGGG CAACCAGCCG GAGCCCTATG ATTGCGGTTC TCCGCAGGAA TTGCTGGAGC TTGAGCGCAC CTACCGCGAT TCGGTGCATT TCCAGCGCGA CAAGGCCTAT TGGTCGGAGC AGATGAAGGG TCTGCCGGAG CCGGTGACCT TGATGAAGAA GAAAGGCGAG CCATCCGGTG GCCTGCTGCG CCATACGACG GTCATCGATC GCCAGACGGT CAAGGCGCTT GCTGAGATCA GCCGTGGCTT TGGCGCCAGC GTGCCACAGG CCTTGATTGC CCTGGTCGCG GCCTATTACG CCAAGGCGAC CGACTGCGAA GAGCTGACCA TGGTCACCAT GGTGACGGCC CGGATCAGCC AGACGATGCG CCGCATTCCG GGCATGACTG CCAATGCGGT TCCTCTGCGG TTTTCGATCA CGCCTGACCT GTCCTGGCGC GAATTGACCG GTCAGGTTTC CCAGCAGATG AGCCGGGCGC TGCGCTATCA GCGCTATCGC TATGAGGACA TTCGCCGCGA TCTCGGCATG GTCCGCCAGG ATGCGCAGAT TGCCTGGCTG GGCGTCAATA TCGAGCCTTT CGACTACGAT CTGCGCTTTG ATGGACAGCC AACCACCGTG CACAACCTTT CGAACGGCAC GATGACGGAT TTCACCATCT TCGCCTATGA CCGTGGTGAC AATGGCGACC TGCGCATCGA TTTTGATGCC AATCCGGCGC TCTATACGCT GGAAGAGCTT GCCGATCACG AGGCGCGGTT CACCCGCATG TTGAGAGAGA TCCTCGTGAC GCCTGAACAG CCCCTGCGCG ATTTCAGCCT GCTGTCGAAG TGGGAGCGGC AGGAAATTCT CACCGACTGG AACGATACGT CCCATAAACT GCCGGATCAG ACCTGGCCGG AACTGTTCCG GGCGCAGGCG GCACGCACGC CGGATGCGGT AGCGCTATCC TTTGGCGGTC GCCAGATGAC CTATGGTGAG CTGGATGCCG CCTCCGATCA TCTGGCTGGC TATCTGATGG AAAAGGGCGC GGTACCCGGT TCTCTGGTGG CTGTGGCTGT GCCGCGGTCT GAAAACATGG TTGTGGCGCT GCTGGCGGTG CTGAAAAGCG GTGCCGCCTA TCTGCCGCTT GATCCGGCTG ATCCAGCCTC GCGGGTGGCG ATGATCCTGG AGGATGCGCA GCCAGCCTGC GTTATCACCA CAGAGGAAGT GGCTGGCAAC CTGCCTGATG CCACCGACAA TCTGATCTTC CTCGACAAGC CCCTCGAGCG ACAGGGACGC GATCTGCCGA AAGGGCCGTC GCTGAGCGAC ACGGCCTATA TCATCTTCAC ATCCGGCTCG ACCGGTCGGC CCAAGGGCGT GGAAATTCCG CATCGGGGCC TGATGAACTT CCTGTTGTCG ATGCAGGATC TGTTGAAACT GGACAGTGAA GACCGTTTGC TGGCCGTGAC GACGATCTCC TTCGATATTG CAGCCCTTGA GCTTTATCTG CCGTTGCTGG CAGGCGCGCG CACGGTGATC GCGCTCCGCT CGGAAGTGCG CGATCCGGCA GTGCTGCATG GGTTGATCCG CAGTGCGGGT ATCACCATCA TGCAGGCGAC GCCGTCTTTG TGGCGGTCCT TGCTGGCCGA TCATCATGAG GGACTGACGG GCTTGCGCAG CCTTGTCGGT GGCGAGGCTC TGCCTGCCGA TCTCGCCCAC AAGATGGCAC GGCTCGGTCA TCCCGTTCTC AATGTCTACG GACCGACGGA AACCACGATC TGGTCCACCA ACATGCCGCT TTTGGGCAGC GATCTCGACA GTGCGCCAAT TGGCCGGCCA ATCTGGAACA CCCGCGTTTA TGTCCTCGAT CGGCATTGCC AGCCAGTGCC GCCCGGCTTC ATCGGTGAGC TGTATATCGG TGGTGCGGGC GTGGCGAAGG GCTACCTGAA CCGCCCGGAC CTGACGGCGG AAAAATTCAT GGCTGATCCT TTCGCAGGCG AAGGCGAGCG GATCTACCGG ACCGGCGACC TGGTGCGCTG GCGGCGCGAT GGCGTGCTGG ATTATCTCGG TCGCAACGAC CACCAGATCA AGATTCGCGG CTTCCGGGTG GAGCCGGGCG AAATCGAGGC GGCGCTTTCC GCCCTGCCGC AGGTGCGTGA AGCGGTGGTT ATTCTGCGCG ATGATCCGGG CCGCGAAAAG CGACTGGTTG CTTATGTTGT CCCCAGAGAG GGTGCGGTAG GCGAGGGTGC CTCCTTGGAT GCTGCTGATC TTTCGGAGCG GCTAGGCAAG GTTCTGCCCG TTCACATGAT CCCGGCAGCC TATGTGGTGC TGGACGCTAT TCCGTTGAAC TCGAATGGCA AGACCGACCG GCACGCGCTG CCGGTACCGC AATGGACGGT AACGGAAGGC ATAGCCCTGC CGGGGACCGA TGCTGAAAAG CGGCTTGCCG CCTTGTGGTG TGAGATCCTC GGTCTGGAGC AGATCGGCAT TCACGACAGT TTCTTCGTGC TCGGCGGCGA TTCGCTGGCC GCAGCCGGAA TGATTTCCGC CGTTCGCAGC CGGTTGAAAG GCGAAATTCC GCTTGGTGCG GTGTTCGAAA CGCCCACCAT TGCCGCCTTG GCCGTGCATT TGGATGAGGC AAGTGCGGGT TCACCGTTGA TCGAGCCGGT GCTGGCCATC CGCGCCAAGG GCGAGCGCCC GCCGCTGTTC TGCATCCATC CGGTGCTGGG CCTGGGCTGG AGCTTCTTCT CGCTCGCACA ACATTTGAGC GAGGATGTCC CGGTTTACGC CCTGCAATCG GACGGGTTGC ATGACCTCGC TGCCCTGCCG CGCTCTATCG AGGACATGGC TGCGCTCTAC GTGCAGAGAA TTCGCAAGAT CCAGCCGCAG GGGCCATATC ATCTGCTGGG CTGGTCATTG GGCGGGCTGA TTGCCCATGA AATGACCCGG CAATTGCAGG CAGAGGGCCA GGCTATTGCG TTCCTGGGCA TGATGGACAG CTACCATTTC AAGCCTGCGG CCCAATTGCA GGACGATGCG ACGCTGGCGC GGGCAGCTCT TGGGTTCCTC GGCTTCGACG AAAAGGCGGC AGGCGACAAG CCATCGCTGG CCGAGCTTGG CGATTTCGTG CTGAAAATGT TCGATACGGA CAACCATGTC CTGCTGGAGC AGGTTCACCA GTTCGATCCG GATTTCGTCG AACGTGCCAA GGCGACCATC TTGCACAATC TGGAAATTGC CCAGCGCTTT ACCCCGGGCA AGATCGATGC CGATGTGCAT TTCTTCCGCG CCGAACCAAG TGCGGGCAGC GATGCGCTGA ACACCATCCT TAACTATGAT GCGGAAACCT GGTTGCCGCA TGTGGAGGGC AGGGTTTACC TGCGCGACAT GACCTGCAAC CACCACGACA TGCTGAATAT CGAACCGGCA TCCCATATCA GCGCCGTCGT TCAGGCAGAA CTGCTGCGTG AATTCCTGGT CCTGCGGCGG CCACAGACTG AGGTCAAGAT TGAGCGTGTG TCGCGGTTTG CCTAA
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Protein sequence | MSFVGRHEQV FPVSLAQAGL WVKQKVAPAD LSFVLAESIE IHGPVHPGLF CQALRRLSDD VAVTRSRIKE IEGQPHQVVM AAYCGVFDVI DFSGADNPGA SAMDWMRKQM SKPLDLANDN LWGSSLLKLG ATEWVWYHWA HHIIMDGFSG GLLARRLADI YSALAQGNQP EPYDCGSPQE LLELERTYRD SVHFQRDKAY WSEQMKGLPE PVTLMKKKGE PSGGLLRHTT VIDRQTVKAL AEISRGFGAS VPQALIALVA AYYAKATDCE ELTMVTMVTA RISQTMRRIP GMTANAVPLR FSITPDLSWR ELTGQVSQQM SRALRYQRYR YEDIRRDLGM VRQDAQIAWL GVNIEPFDYD LRFDGQPTTV HNLSNGTMTD FTIFAYDRGD NGDLRIDFDA NPALYTLEEL ADHEARFTRM LREILVTPEQ PLRDFSLLSK WERQEILTDW NDTSHKLPDQ TWPELFRAQA ARTPDAVALS FGGRQMTYGE LDAASDHLAG YLMEKGAVPG SLVAVAVPRS ENMVVALLAV LKSGAAYLPL DPADPASRVA MILEDAQPAC VITTEEVAGN LPDATDNLIF LDKPLERQGR DLPKGPSLSD TAYIIFTSGS TGRPKGVEIP HRGLMNFLLS MQDLLKLDSE DRLLAVTTIS FDIAALELYL PLLAGARTVI ALRSEVRDPA VLHGLIRSAG ITIMQATPSL WRSLLADHHE GLTGLRSLVG GEALPADLAH KMARLGHPVL NVYGPTETTI WSTNMPLLGS DLDSAPIGRP IWNTRVYVLD RHCQPVPPGF IGELYIGGAG VAKGYLNRPD LTAEKFMADP FAGEGERIYR TGDLVRWRRD GVLDYLGRND HQIKIRGFRV EPGEIEAALS ALPQVREAVV ILRDDPGREK RLVAYVVPRE GAVGEGASLD AADLSERLGK VLPVHMIPAA YVVLDAIPLN SNGKTDRHAL PVPQWTVTEG IALPGTDAEK RLAALWCEIL GLEQIGIHDS FFVLGGDSLA AAGMISAVRS RLKGEIPLGA VFETPTIAAL AVHLDEASAG SPLIEPVLAI RAKGERPPLF CIHPVLGLGW SFFSLAQHLS EDVPVYALQS DGLHDLAALP RSIEDMAALY VQRIRKIQPQ GPYHLLGWSL GGLIAHEMTR QLQAEGQAIA FLGMMDSYHF KPAAQLQDDA TLARAALGFL GFDEKAAGDK PSLAELGDFV LKMFDTDNHV LLEQVHQFDP DFVERAKATI LHNLEIAQRF TPGKIDADVH FFRAEPSAGS DALNTILNYD AETWLPHVEG RVYLRDMTCN HHDMLNIEPA SHISAVVQAE LLREFLVLRR PQTEVKIERV SRFA
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