Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3324 |
Symbol | |
ID | 7387479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2750125 |
End bp | 2751042 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652207 |
Product | transcriptional regulator LysR family |
Protein accession | YP_002550391 |
Protein GI | 222149434 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.861783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTGT CGAAACAGTT CCCCGTCAAT GCCCTGCGCG TGTTCGAGGC CGTCGCCCGC CACAATGGCT TTACCCGCGC CGCCGAAGAA CTGGGCATGA CGCAGACGGC GGTGAGCTAC CAGATCAAGT TGCTGGAGGA TAATCTCGGC ACGCTGCTGT TCCTACGAAC GTCAAGGCAA ATCAGCCTGA CCGAGGCGGG GGAGCGGCTG CTGCCGAAAA CGCGGGAAGG CTTCGAGCTG CTGCGCGAGG CCGTGGCACT GGCAAGGCAT GAGGCGAGCG AAGTTCTGGA AATTCACTCC ACGCCAACCT TCGCCTCCCA TTGGCTGGCG CGCCATCTCG GCAGCTTTCA ACTCCAGCAT CCGGGTATTG CCGTGCGCCT GCTGCGAAGC GATGAGAAGC AGCGGGATTT TGCCCGTGAC GGCGGCGATG TCGGCATTCA TATCGGCAAG GAGCCGGTAG CCGGATTGAT CTGCCATCCG ATTTTGAAGC TGGATTATGC CCCCATGCTC AGTCCGGCGC TGGCCGACAG CATTGGCGGC ATCCGCGAAC CCGCAGATCT CCTCAAACTG CCGCGCGTGA GCAGTTGTGA GGATTGGTGG GCGGACTGGT TTCACAGCGC TGGCATTGCA TCTCCCCTGC CAGCCTCTAT CGGCCTCGAC GCGCAGGGCG CCCTCGACCT TCAAGCCGGT GCAGCTATGG CCGGACATGG CGTCGCCATT CTCAGCCCCT TCTATGTCGA GGAAGAACTC GCATCCGGCC GCCTGATCCA GCCCTTCGAG CTGCTGTTGG GGGATGAGCA GATCTACTGG CTGGTCTACC CGCCATCGCG CCGGACCATG CCGAAGGTCA AAGCCTTTCA CCAATGGCTG ATCGCAAGCC TGCCGCCCTT CGAACGGAAC GGTGTCCATA CGTCCTGA
|
Protein sequence | MKLSKQFPVN ALRVFEAVAR HNGFTRAAEE LGMTQTAVSY QIKLLEDNLG TLLFLRTSRQ ISLTEAGERL LPKTREGFEL LREAVALARH EASEVLEIHS TPTFASHWLA RHLGSFQLQH PGIAVRLLRS DEKQRDFARD GGDVGIHIGK EPVAGLICHP ILKLDYAPML SPALADSIGG IREPADLLKL PRVSSCEDWW ADWFHSAGIA SPLPASIGLD AQGALDLQAG AAMAGHGVAI LSPFYVEEEL ASGRLIQPFE LLLGDEQIYW LVYPPSRRTM PKVKAFHQWL IASLPPFERN GVHTS
|
| |