Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3309 |
Symbol | |
ID | 7387468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2735285 |
End bp | 2736535 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643652196 |
Product | transport protein |
Protein accession | YP_002550380 |
Protein GI | 222149423 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1133] ABC-type long-chain fatty acid transport system, fused permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.791953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTCACT CATTCTTCCC CAAGCCGAAA TTGTTTTTTC CAACCGCCGC GCTGTGGGCC ATGCTTGCCA TCGCATTTTG GTACGGTTTG GGTGAACAAC TTGGTACTCA CTTGGGCTTT GCATCTCAGG CTCAAGGTGC CGAACCAACA GTAGGTGTTT CGATTTTTTG GGCACCTGAT TTTATTTGGT TTTACATCTA CTTTTCTGTG GTTGTCGCTA TTTTTGCTGG GGCTTGGGCA GTTGCATCGC CGCATCCATG GCAACGGTGG TCGGTAGTTG GTTCCGCGAT CGTTCTTTTT ACTGTCTATT TCCAGGTTCA AGTCAGCATT GCGATCAATA CTTGGAACGG GCCGTTTGGT GATTTGATAC AGGCAGCTGT ATCAAAATCG CGCCCGGTCG CTGCGGGTGA ATTTTATTCG CAATTTATTG TTTTTCTTGA AATTGCTTTT CTTGCAGTGG CTGTTTCCGT TCTAACCCGG TTTTTCGTTA GTCATTATAT CTTTCGCTGG CGCATCGCTA TGACGGACTT TTACATGGCC AACTGGCCAA AGTTGCGTCA TATCGAAGGT GCCTCACAGC GCGTTCAGGA AGATACGATG CGCTTTGCAA CGACTGTCGA AAGTTTAGGT GTGAGCCTCA TCAGCAGCGT TATGACGCTG ATCGCTTTCA CTCCGCTGTT AATACGACTT TCGGAAAATG TTAAGGAACT GCCCTTGGTC GGGGCTATCC CTTATCCGCT CGTGTTCGCT GCGGTTTTGT GGTCTGCCTT TGGTACTGCT CTTCTTGCAT TGGTCGGCAT TAAATTGCCA GGTCTTGAGT TTCGCAACCA ACGTGTGGAA GCTGCGTACC GCAAAGAACT TGTATACGGT GAAGACCATG CTGACCGAGC AGAATTGCAG ACGATGAATG GTTTGTTTGA TGCCGTGCGT CGCAATTACT TTCGTTACTA CTTCCATTAT ATTTATTTCA ATGTCGCTCG GTATTTTTAT CTGAACTTGG ATACGATATT TTCTGTTGCA GTTCTTGTGC CTTCATTTGT CGCTGGCACA ATTACTCTTG GCTTGTTGAA CCAGATATCG GGAGCATTCG GACAAGTTAC GTCTTCTCTG CAATACCTCG CGAATTCTTG GACAACGATC GTTGAGCTTC TTTCTATTCA AAAGCGTTTG AAGGCGTTTG AAGCCGCAAT CCAGGATGAG CCATTGCCTC AAATTGATCA ACGATATTTG GCACGGCAAG ACAGTGATTA A
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Protein sequence | MFHSFFPKPK LFFPTAALWA MLAIAFWYGL GEQLGTHLGF ASQAQGAEPT VGVSIFWAPD FIWFYIYFSV VVAIFAGAWA VASPHPWQRW SVVGSAIVLF TVYFQVQVSI AINTWNGPFG DLIQAAVSKS RPVAAGEFYS QFIVFLEIAF LAVAVSVLTR FFVSHYIFRW RIAMTDFYMA NWPKLRHIEG ASQRVQEDTM RFATTVESLG VSLISSVMTL IAFTPLLIRL SENVKELPLV GAIPYPLVFA AVLWSAFGTA LLALVGIKLP GLEFRNQRVE AAYRKELVYG EDHADRAELQ TMNGLFDAVR RNYFRYYFHY IYFNVARYFY LNLDTIFSVA VLVPSFVAGT ITLGLLNQIS GAFGQVTSSL QYLANSWTTI VELLSIQKRL KAFEAAIQDE PLPQIDQRYL ARQDSD
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