Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3277 |
Symbol | tdk |
ID | 7387446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2712038 |
End bp | 2712616 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652176 |
Product | thymidine kinase |
Protein accession | YP_002550360 |
Protein GI | 222149403 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAGC TGTATTTCAA TTATGCCGCC ATGAATGCCG GTAAATCCAC CATGCTGTTG CAGGCCTCCT ACAATTATCA GGAGCGCGGT ATGCGCACGG TAATTTTTGT CGCCGCACTG GATGATCGAG CCGGGCGCGG GCGGGTCGCT TCCCGCATTG GGCTTTCCAG CCCCGCCGAA ACCTTCGAGC CGGGCACCGA TCTGTTTGCC GTGGTCGAGG CCATGCATGC AAGCGAGCCG ATTGCCTGCG TTTTTGTCGA CGAGGCCAAT TTTTTGAGCG AGCACCATGT CTGGCAATTG GCGCGGATTG CCGACCGCCT GCATATTCCG GTCATGGCCT ATGGCCTGCG CACGGATTTC CAGGGCCAGC TGTTTCCGGC CTCTCGGTTG CTGCTGGGGA TTGCCGACGA ATTGCGCGAA ATCCGCACGA TCTGCCATTG CGGCCGCAAG GCGACGATGA ATGCCCGCTT CGATGCGAGC GGCCAGGTGA TGCGCGAGGG TGCGCAGATC GAAGTTGGCG GCAACGAGAA ATATGTGTCC TTCTGCCGCC TGCATTGGGA TGAACTGTTC AATGGGTGA
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Protein sequence | MAKLYFNYAA MNAGKSTMLL QASYNYQERG MRTVIFVAAL DDRAGRGRVA SRIGLSSPAE TFEPGTDLFA VVEAMHASEP IACVFVDEAN FLSEHHVWQL ARIADRLHIP VMAYGLRTDF QGQLFPASRL LLGIADELRE IRTICHCGRK ATMNARFDAS GQVMREGAQI EVGGNEKYVS FCRLHWDELF NG
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