| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3249 |
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| Symbol | leuA |
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| ID | 7388168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2684548 |
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| End bp | 2686254 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652152 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002550336 |
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| Protein GI | 222149379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.44763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAGA GCAATTCCGT GCACAAGGGC ATGCCCGACG CGGCAAGCAA ATACCGGCCC
TACCCCCAGA TCGACATTTC CGACCGCACC TGGCCGGGCA AAACCATCAC CCAAGCGCCG
ATCTGGTGTT CGGTGGACCT GCGCGACGGC AACCAGTCGC TGGTCAACCC GATGGGCCAC
GACCGTAAGG CCCGGATGTT CCAGTTGCTG CTGGAAATGG GCTTCAAGGA AATCGAGATC
GGCTTTCCCT CGGCCTCACA GACCGATTTC GACTTTGCCC GCTGGTGCGT CGAGCAAGGC
AATGTGCCTG ATGATGTCTC CCTGCAAGTG CTGGTGCAGT GCCGCCCGGA ACTGATCAGC
CGCACCTTCG AGGCCCTGGA AGGCGCCCAT AAGCCAATCA TCCATTTCTA CAATTCGACC
TCGGAATTGC AGCGTCGCGT GGTGTTTGCC AAGGACGTTC CTGGCATCAA GCAGATCGCC
GTCGATGCGG CGAAAATGAT TATCGACATG GCCACCAAGG CTGGCGGCGG CTACCGGTTT
GAATATTCGC CGGAAAGCTT TACCGGCACC GAACTGGACG TGGCGCTGGA GATCTGCAAC
GCAGTGATTG CCGAGATCAA GCCAACCGCC GACAACAAGC TGATCCTCAA CCTGCCCTCG
ACTGTGGAAA TGGCGACGCC GAACATCTAT GCCGACCAGA TCGAGTGGAT GTGCCGCAAT
ATCGACAACC GCGAAAACGT CATCATCTCG CTGCATCCGC ACAACGACCG CGGCACCGGC
ATCGCCGCCA CCGAACTGGC GCTGATGGCA GGTGCCGACC GGGTGGAAGG CACGCTGTTT
GGCAATGGCG AGCGCACCGG CAATGTCGAT GTCGTGACGC TGGCGCTGAA CATGTACACC
CAGGGCATCG ATCCCGAGCT GGACTGCTCG CAGATCGAGC GCATCAAGGA TGTCTACGAA
TATGCCAATG AAATGACCAT TCCGGAACGC CATCCCTATG TTGGCGAACT GGTCTATACC
GCCTTTTCGG GTTCACACCA GGATGCGATC AACAAGGGCA TGAAGGCAGT GAAAAAGGCC
AATTCCCCGG TCTGGGAAGT CCCCTATCTG CCCATCGATC CACAGGATGT CGGCCGCTCC
TACGAGGCAA TCATCCGCAT CAATTCCCAA TCGGGAAAAG GCGGCATCGC CTATATCCTG
CAACAGGATT ACGGCATCAA CCTGCCGCGC AACCTGCAGG TGGAGTTCCG AGAGGAAATC
CAGCGCATTA CCGATGAAGA AGGCGTGGAA CTGCCCTCCA AGCGGATCTA TGACAGCTTC
ATCAGCCGCT ATATCGACCA GCTCGAAGCC CGGCTGAAAT TCGTCGATCA CCACACCTAT
CCCGACACGG CCACCAAGGG CGTGCGGATC GTCGCTGCCG AAATCAACGA TGGCGGCGAA
GTGAAGCGGA TCGAAGGCAA GGGTAACGGC CCGATTGACG GTTTCGTCAA CGCGCTCTCC
ACCTATCTGG GCATCGAGAT TTCGGTGCGT GACTATTCCG AGCACTCTCT GCAACACGGC
TCCAACGCCG CGGCCATCGC CTATGTGGAA ATGGATCATC CCGGCGGGCG GCTGTTCGGT
GCCGGTATCA ACCAGAACAT CGTCACCGCC TCGCTGGAAG CCATCGTCTC GGCCGCCAAC
CGGGTGTTGG ACGCAAGGGC GAAGTGA
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| Protein sequence | MLKSNSVHKG MPDAASKYRP YPQIDISDRT WPGKTITQAP IWCSVDLRDG NQSLVNPMGH
DRKARMFQLL LEMGFKEIEI GFPSASQTDF DFARWCVEQG NVPDDVSLQV LVQCRPELIS
RTFEALEGAH KPIIHFYNST SELQRRVVFA KDVPGIKQIA VDAAKMIIDM ATKAGGGYRF
EYSPESFTGT ELDVALEICN AVIAEIKPTA DNKLILNLPS TVEMATPNIY ADQIEWMCRN
IDNRENVIIS LHPHNDRGTG IAATELALMA GADRVEGTLF GNGERTGNVD VVTLALNMYT
QGIDPELDCS QIERIKDVYE YANEMTIPER HPYVGELVYT AFSGSHQDAI NKGMKAVKKA
NSPVWEVPYL PIDPQDVGRS YEAIIRINSQ SGKGGIAYIL QQDYGINLPR NLQVEFREEI
QRITDEEGVE LPSKRIYDSF ISRYIDQLEA RLKFVDHHTY PDTATKGVRI VAAEINDGGE
VKRIEGKGNG PIDGFVNALS TYLGIEISVR DYSEHSLQHG SNAAAIAYVE MDHPGGRLFG
AGINQNIVTA SLEAIVSAAN RVLDARAK
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