| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3168 |
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| Symbol | proC |
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| ID | 7388111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2624107 |
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| End bp | 2624928 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652095 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_002550279 |
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| Protein GI | 222149322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.624032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTT CGCAGACCTC GGGTCCGATC GTTCTTGTCG GCGCCGGCAA TATGGGCGGT
GCCATGCTGT CAGGCTGGCT GAAGAATGGC GTTGATCCGG CCTCGGTGAT CGTTATTGAT
CCCGGCGCGA GTGATGCCGC CAAGGACCGG TTTGCCCAGG CTGGCGTGCG CCATGTCACG
CAGGCGCCGG GCGATCTCGT GGCTGGTCTG CTGTTTCTGG CCGTCAAGCC GCAAGTGATG
GAAGCGGTGC TTGCGCCGCT CAAGCCCCTG GTCGATGCCG ATACGGTTGT GGTGTCCGTG
GCTGCCGGAA AGACCCTGTC TTTCATGGAA ACCCATTTGG GGGTTGCGGC CATGGTCCGC
GCCATGCCCA ATACGCCTGC CATGGTCGGA CGTGGCGTGA CCGGCGCTTA TGCCAATAGC
GAGGTCAGTG AAGATCAGCG GGCTCGGGTG ACGGCGCTTT TGGCCGTTTC CGGTCCAGTG
GAGTGGGTTG CTAGCGAAAG CGATATCGAC GCGGTCACCG CCGTTTCGGG CAGCGGTCCG
GCCTATGTGT TTTATCTCGT CGAGTGCATG GCTGAGGCAG GCCGTAAAGC TGGTCTGCCA
GCGGACCTCG CCATGCGTCT CGCACGGGAA ACCGTCGCGG GGGCTGGTGA AATGTTGCAC
CAGTCCCCGG ACGATGCCGC CACGCTGCGC AAGAATGTCA CCTCGCCGGG CGGCACCACG
GCGGCGGCCC TTGGCGTGCT GATGGCTGAC CAGGGCATGC AGCCATTATT CGACACGGCG
ATAGCCGCCG CGAAACGCCG GGCCGAGGAG CTTGCCTCTT GA
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| Protein sequence | MASSQTSGPI VLVGAGNMGG AMLSGWLKNG VDPASVIVID PGASDAAKDR FAQAGVRHVT
QAPGDLVAGL LFLAVKPQVM EAVLAPLKPL VDADTVVVSV AAGKTLSFME THLGVAAMVR
AMPNTPAMVG RGVTGAYANS EVSEDQRARV TALLAVSGPV EWVASESDID AVTAVSGSGP
AYVFYLVECM AEAGRKAGLP ADLAMRLARE TVAGAGEMLH QSPDDAATLR KNVTSPGGTT
AAALGVLMAD QGMQPLFDTA IAAAKRRAEE LAS
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