| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3164 |
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| Symbol | petR |
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| ID | 7388108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2621506 |
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| End bp | 2622204 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652092 |
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| Product | two component response regulator |
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| Protein accession | YP_002550276 |
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| Protein GI | 222149319 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0516901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCGTA TTGACCTGAC CGACGATGCC CCGCACCTCC TTGTTGTCGA TGACGATACA
CGAATCCGCG ATCTCTTGCA TCGCTACCTG ACCGAGCAGG GCTTTCGCGT CACCGTCGCT
GCTGAAGCGC AGGAAGCCCG CCGCAAGCTG GCGGGCCTGG CCTATGACCT GCTAATCGTT
GATGTGATGA TGCCGGGCGA GAACGGCCTG TCGCTGACAA AATCGCTAAG CGGCGAGATC
AATGCGCCAA TCATTCTTCT GACGGCCCGC ACGGAAGCCG ATTCGCGCAT TGCCGGGCTA
GAGGCAGGTG CCGACGACTA TCTTGCCAAG CCGTTCGATC CGCGTGAACT GGTGCTGCGC
ATCAACAACA TCCTGCGGCG CAACACCAGC GCCGATACGC CGAAAATCGA ACAGGTGATG
TTCGGCCCCT ATACATTCTC CATCCTGCGC AAGGAGCTGA AAAAGGGACC AGAGGTCATT
CACCTGACCG ACCGCGAGCA GGACATCATG CTGCTGTTTG CCAACCGGGC GGGTGATACC
ATTCCGCGTC ACGAACTGGT GGGCGAGGAT ACCGATGTCG GTGAACGCAC CATCGACGTG
CAGATCAACC GCCTGCGCCG CAAGATCGAG GACGACCCGG CCAATCCGGT CTGGCTGCAA
ACCGTGCGCG GCATCGGTTA TCGCCTCAGC CGGGATTAG
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| Protein sequence | MKRIDLTDDA PHLLVVDDDT RIRDLLHRYL TEQGFRVTVA AEAQEARRKL AGLAYDLLIV
DVMMPGENGL SLTKSLSGEI NAPIILLTAR TEADSRIAGL EAGADDYLAK PFDPRELVLR
INNILRRNTS ADTPKIEQVM FGPYTFSILR KELKKGPEVI HLTDREQDIM LLFANRAGDT
IPRHELVGED TDVGERTIDV QINRLRRKIE DDPANPVWLQ TVRGIGYRLS RD
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