| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2975 |
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| Symbol | copC |
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| ID | 7386142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2485920 |
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| End bp | 2486351 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651969 |
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| Product | copper tolerance protein |
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| Protein accession | YP_002550154 |
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| Protein GI | 222149197 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4454] Uncharacterized copper-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.226437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTTCA AGACCGGTCT TTACGCAGCC CTTATTGCAA CGAGCCTGAC GGCATCGGTG
GCTTTCGCGG CTGAAACCCA GATCAAGGTC ACCGAAACGG GTGAGGGTGG TGGTGCCATG
GGGCTGAAGA TGGAGCCTGC AACGGTTGCC GCTGGTCCGG CGGTGTTCCA CGTTCATAAC
GATGCCATGT CGGAAGACCA TGAGATGATC GTGGTAAAGC TGGCAACGCC GGATGCCAAG
ATCCCGCTCG ATACAGCCAA GCACCGCGTT GACGAAAAGA AGTTGAAGAG CCTTGGCGAA
GTGTCGGATT TGAAGCCCGG CGCCGATGGC AAGCTTAAGG TGACGCTGAA GCCAGGCAGC
TATCTGGTGT TTTGCAATAT CAAGGGCCAT TACGAGGCCG GTATGCAGGG CACCCTGACC
GTTACGCCCT GA
|
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| Protein sequence | MMFKTGLYAA LIATSLTASV AFAAETQIKV TETGEGGGAM GLKMEPATVA AGPAVFHVHN
DAMSEDHEMI VVKLATPDAK IPLDTAKHRV DEKKLKSLGE VSDLKPGADG KLKVTLKPGS
YLVFCNIKGH YEAGMQGTLT VTP
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