| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2946 |
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| Symbol | |
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| ID | 7386122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2461788 |
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| End bp | 2463359 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651949 |
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| Product | Amino acid permease protein |
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| Protein accession | YP_002550134 |
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| Protein GI | 222149177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTT ATAGCGACGT CGATAAGCAG GAAGACCTGC ATATCCTCCA TTCCATGGGC
TATGCGCAGG AGCTGGAGCG GCGCATGAGT TCGTTTTCGA ACTTTGCGAT TTCCTTCTCG
ATCATTTGTA TTCTGTCCGG CGGCATCAAT TCGCTGGCCC AGGCGACATC CGGAGCCGGT
GGGGCGGCCA TCGGCATCGG CTGGCCGTTG GGCTGCCTGA TTTCCGGCGT TTTCGCGCTC
GGCATGGCAC AGATTGCCTC GGCCTATCCC ACGGCGGGCG GGCTTTACCA TTGGGGTTCG
ATTCTTGGTA ATCGGTTCAC CGGCTGGGTG ACGGCCTGGT TTAACCTGAT CGGCCTGGTC
ACTGTGCTCG GTGCCATCAA TGTCGGCACC TGGGGCTTTT TCGCCGGATC GATTGCCGGC
TGGTTCGGCA TCAATGTCGA TACGACGACC GCAGGCGGCT TTGCCAATCA GATCCTGTTC
GTGGCGGCGA TCACAGCAGC TCAGGCGCTG ATCAACCATC TCGGCATCAA GCTGACCGCC
AAGCTGACGG ATCTCTCGGG TTATCTGATC TTCATCACTG CCATCGCCTT GACAATCGTC
TGCCTGATCG GCGTTAAAAC CTGGGATTTC TCCCGCATCT GGACCTTCAC CAATTATTCC
GGCACACCAG CGGGCGATGC GCCAGTCTGG CCGCAGACCG GCAGTGTCTG GTATATTTTT
GCTCTCAGCC TGCTTTTGCC GATCTATACG ATCACCGGTT ACGATGCCTC CGCCCATACC
TCGGAGGAAA CCATCAAGGC TTCGGAATCG GTGCCGAAGG GGATTATTTC CTCGGTCTTC
TGGGCATCGC TGTTCGGCTA TATCATGTTG CTGGCCTTTC TCCTGGCTAT TCCCGATATG
AATGAAGCCG CAGCCCAGGG CTGGAACGTA TTCTTCTGGA CGCTGAACAG CGTCACCCAT
CCGGTTGTCG CCAATATCCT GTATCTGGCA ATTTTCGTTG CGCAATTCAT CTGCGGTCTG
GCAACCGTCA CCTCCGTGTC GCGGATGATC TATGCCTTTT CGCGTGATGG CGGCCTGCCT
GCCTCCAAGG CGCTTTCCAG TGTCAGCCCA AGGTTCCGTA CTCCGGCGAC GGCCATCTGG
GTCGGGGCTG TGCTTTCAGT GCTGTTCGTC TGGGGTGCCT CGCTTGTCAC CATTGCCGGT
GCCTCGGCTT ATACGATTGT CGTGTCCTGC ACGGTGATCT TCCTGTTCCT GTCCTTCGCC
ATTCCGATCG TGCTCGGTAT GAAGGTGATC GGTACGGCGA AATGGCCGAA AATGGGACCG
TGGAATATGG GGATCGGCGC TTACCGGTTT GTCGGTCTTC TGGTCATCCT GGCCATGGTT
GCCATCTTTA TCATCGGGGT GCAGCCGCCC AACCAGTGGG CGCTGTATAT CACTGTCGGT
TTTCTGGCGC TGACGGCGCT GATCTGGGTT CTGTTCGAGC AGCGTCGCTT CAAGGGCCCG
CCGATTGGCG ATGAAGTGGC AAAGCGGCAG GCGGAAATTG CCGCTGCGGA AAAAGCTGTC
GGCCAAGCCT GA
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| Protein sequence | MTGYSDVDKQ EDLHILHSMG YAQELERRMS SFSNFAISFS IICILSGGIN SLAQATSGAG
GAAIGIGWPL GCLISGVFAL GMAQIASAYP TAGGLYHWGS ILGNRFTGWV TAWFNLIGLV
TVLGAINVGT WGFFAGSIAG WFGINVDTTT AGGFANQILF VAAITAAQAL INHLGIKLTA
KLTDLSGYLI FITAIALTIV CLIGVKTWDF SRIWTFTNYS GTPAGDAPVW PQTGSVWYIF
ALSLLLPIYT ITGYDASAHT SEETIKASES VPKGIISSVF WASLFGYIML LAFLLAIPDM
NEAAAQGWNV FFWTLNSVTH PVVANILYLA IFVAQFICGL ATVTSVSRMI YAFSRDGGLP
ASKALSSVSP RFRTPATAIW VGAVLSVLFV WGASLVTIAG ASAYTIVVSC TVIFLFLSFA
IPIVLGMKVI GTAKWPKMGP WNMGIGAYRF VGLLVILAMV AIFIIGVQPP NQWALYITVG
FLALTALIWV LFEQRRFKGP PIGDEVAKRQ AEIAAAEKAV GQA
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