Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2865 |
Symbol | |
ID | 7385978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2383359 |
End bp | 2383982 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643651887 |
Product | DNA polymerase III epsilon subunit-like 3-5 exonuclease |
Protein accession | YP_002550072 |
Protein GI | 222149115 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.161368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACGC CATTGCAGCC CAAAATCATC GCAATCGATT TCGAGACCGC CAATGAAGAG CGAGGCAGCG CCTGTTCGGT CGGGCTGGCC TTTGTCGAGA ACGGGCAGGT GGTGCGGGTG GAGGAGCGGT TGATCCGGCC AAAAACCATG CGGTTTTCAT CCTTCAACAT CGCCATTCAC GGGATTCGGC CTGATCATGT CGAGGATGCG GGCGAGTTTC CCGAGGTGAT GGACGAATTC GCCGATGATT TCTCGGGCGC GATGGTGGTG GCGCATAATG CCGCCTTCGA TCTGTCGGTG TGGCGGGCGA GTTGCGATCT CTATCGCCAG CCCTATCCAA GCCTGTCTTA CGTGTGCAGT GTCAAGCTGG CGCAGAAGGT CTGGCCGCAA TTGCCCTCCC ATCGGCTGAA TGTGCTGGCG GCACATCTGC AATTGTCCTT CCGGCATCAC AATGCAGCCG AAGATGCGTC GGTTTGCGCG CAAGCGGTGA TCGCGATGAT GGAGCGCCGG GGCGCGCAGG ACCTGGGCGA GCTTGCTGGC ATGATGGGGA TTTCCATCGG ACGGCTGTTT CCGGGTGGGT ATCAATCCTG CTCGGTGCGC AAGCCAGCGC GGGTTTCGGC TTGA
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Protein sequence | MSTPLQPKII AIDFETANEE RGSACSVGLA FVENGQVVRV EERLIRPKTM RFSSFNIAIH GIRPDHVEDA GEFPEVMDEF ADDFSGAMVV AHNAAFDLSV WRASCDLYRQ PYPSLSYVCS VKLAQKVWPQ LPSHRLNVLA AHLQLSFRHH NAAEDASVCA QAVIAMMERR GAQDLGELAG MMGISIGRLF PGGYQSCSVR KPARVSA
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