Gene Avi_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2789 
Symbol 
ID7385924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2321203 
End bp2321823 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID643651833 
Producttranscriptional regulator 
Protein accessionYP_002550018 
Protein GI222149061 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA TGGACCAGCC AACAAAATCC GGCAGACCAG CGGGCCGCCC TCGGGAATTC 
GACACGGACG TGGCGCTGGA CGCCGCCTTG GTGGTGTTTT CCGAGCGGGG CTACCAAGCC 
GCCTCGATCA GTGAACTTGC CGAAGCCATG GGGTTGACGG CAGGCAGTAT CTACAAGGCG 
TTCGGCGACA AGCGCGGTGT GTTTCTCGCC GCCTTTGATC GCTACTGGTC GGTGCGCCAT 
GCGATGATCC TGAAGCGCAT GGCACCGCTT AAGACCGGGC GGGAAAAGCT GTTTGCCCTT 
TTGCAGCATT ACGCCGAACA CGCCCATGGT GCGGCAGGCC GGCGCGGCTG CCTCGTAGTC 
GGCGGCGCCA ACGATCTGTC ACTGCTGGAT GCGGAAGCCT CCGCCCGCGT GGGTCTTGCT 
TTTACCGCCA ACCAGCAGCG CCTGAAGGAC CAGATTGTCA CCGGACAGGC CGATGGCTCG 
ATCCGAGCCG ATCTCAATGC CGATGTCATC TCCAGCGCCC TGCTGTGCCT GACGATGGGC 
ATGCGCGTGG TCGGCAAGAC AGGCCGGACA GAAGACGAGA TGCAGGCCGT GGCGCAAGCG 
GCGCTGCGGC TTTTGGACTG A
 
Protein sequence
MTMMDQPTKS GRPAGRPREF DTDVALDAAL VVFSERGYQA ASISELAEAM GLTAGSIYKA 
FGDKRGVFLA AFDRYWSVRH AMILKRMAPL KTGREKLFAL LQHYAEHAHG AAGRRGCLVV 
GGANDLSLLD AEASARVGLA FTANQQRLKD QIVTGQADGS IRADLNADVI SSALLCLTMG 
MRVVGKTGRT EDEMQAVAQA ALRLLD