| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2709 |
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| Symbol | noxB |
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| ID | 7388369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2245618 |
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| End bp | 2246712 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651770 |
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| Product | D-nopaline dehydrogenase |
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| Protein accession | YP_002549957 |
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| Protein GI | 222149000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.933901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTA TCATTATTGG CGGCGGTGTC GTTGGCCTCT CCGTGGCCTA CGGGTTGCTG
GGCCAAGGCA AGCAAGTCAT TGTGCTTGAC GGCGACGATG GCGATTTCCG GGCATCACGC
GGTAATTTTG GCTTGGTCTG GGTGCAAGGC AAAGGCAGCA AAGCCCCCGC CTATGCCCAA
TGGACGCGCC AATCCGCGAG CTTGTGGAAA GATTACGCGC AAGACCTGCT CCGCGACACT
GGTTTGGATG TCGCGCTCAG TCAGATCGGT GGAATTGATT ACTTCACCGA TGAAGGCGCA
ATGGAACAGC AGCTTGTTGC TCTGGAAACG TTGCGCGGCG CGGTAGACGG TGACTATCCA
TTCGAGGCTT TGAACCATCA GCAGGTCAAG GAGCTTGTGC CCGAAATAGG GCCAAAGGTG
GTCGGTGGTA TCTACTCTCC AATGGACGGC CATGTGAACC CGCTTTTGTT GCTGCGCGCT
TTATCAATGG CCGTGCGAAC AGCGGGTGGG GTGATTAGAA CCCGGGCAAA AGTGAAGGAT
ATCACGGCGA AAGACCGCGA TTTCACAGCC CACCTTGAAG ACGGCAGCAC GGTTGAAGGT
GAAGGATTGG TTCTCGCAGC TGGATTGGGA GCCTTGTCGC TTGGTCACAA GCTCGGCTTT
AAAGTCCCCA TTCGCCCTCT ACAGGGACAG GTGCTGATAA CAGAGAAACT TCCCTTTTTC
ATGCGCTATC CTTCAGGGAC TTTGCGGCAG GTCAACGAAG GCGGAGTCCA AATCGGCGCC
ACCAAAGCAG AGGTAGGTCT GGACGACGGG GAGGATCTGG AGACAACAGC GGGGCTTGCA
CAGCACGCCA TTGATGTCTT TCCGCACCTC GCGAAGGTCA AACTTGTTCG CAGTTGGGCG
GCTCTTCGCA TCATGTCGCC AGATGGTCTT CCGATCTATC AGCGCTCGGC TCAATATTCC
GGAGCGACAT TCGTCACGTG CCATAGCGGG ATAACCCTCT CGGCAGCCCA TGCCCGGTTG
CTGCCTGATT GGGTTTTGGG TCGCAACACC GCACCTGACC TGTCTCATTT CAGTGAAAGC
AGATTTCATG TTTAG
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| Protein sequence | MSIIIIGGGV VGLSVAYGLL GQGKQVIVLD GDDGDFRASR GNFGLVWVQG KGSKAPAYAQ
WTRQSASLWK DYAQDLLRDT GLDVALSQIG GIDYFTDEGA MEQQLVALET LRGAVDGDYP
FEALNHQQVK ELVPEIGPKV VGGIYSPMDG HVNPLLLLRA LSMAVRTAGG VIRTRAKVKD
ITAKDRDFTA HLEDGSTVEG EGLVLAAGLG ALSLGHKLGF KVPIRPLQGQ VLITEKLPFF
MRYPSGTLRQ VNEGGVQIGA TKAEVGLDDG EDLETTAGLA QHAIDVFPHL AKVKLVRSWA
ALRIMSPDGL PIYQRSAQYS GATFVTCHSG ITLSAAHARL LPDWVLGRNT APDLSHFSES
RFHV
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