Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2621 |
Symbol | cobD |
ID | 7386622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2168339 |
End bp | 2169310 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651702 |
Product | cobalamin biosynthesis protein |
Protein accession | YP_002549889 |
Protein GI | 222148932 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.246707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAG CGCATCTGCT TATCTTAGCT CTGGCGCTGG TGCTTGACCG CGTGGTTGGC GATCCGCCCT GGCTATGGGC GCGCCTGCCG CATCCGGTCG TGGTGTTTGG CACATGTATT TCGGCCTTCG ACCGGCTGCT GAACCGGCCT GCTCTGGCCG ATCCGCTGCG CAAGGCGGGC GGGGTGTTGA CGATTGTGCT TCTGCTGATG GCAAGCCTTG GCGTTGGATA TGGGCTGCAT CGCCTGTTCG CGGCACTTGG CTTTATCGGG TTCCTGCTGG AAATTGCTGT CACGGCAGTG TTTCTGGCGC AGAAAAGTCT GCTGGACCAT GTGAAGGCCG TCGCCGACGG CTTGTTGCAT GAGGGCCTCG CCGGTGGTCG CCGGGCGGTG TCGATGATTG TCGGGCGCGA TCCCGATGTG CTTGATGAGG CCGGTGTGGC GCGTGCCGCG CTGGAAAGCC TGTCAGAAAA CTTTGCCGAT GGGGTGGTGG CACCCGCCTT CTGGTATGGC GTGCTCGGTC TGCCGGGTCT GCTTGCCTAT AAAATGCTGA ACACTGCCGA TTCGATGATT GGCCATAAAT CCGAACGCTA TGTGCAATTC GGCTGGGCTT CTGCACGGCT GGACGATTTG GCCAATTGGC CCGCTGCCCG GCTGGCGGGA TTGTTGATCG TCTGTGCTGC CGGCACTGGT GAGGGTATAG CGACGGCTAA AAGGTGCTTC ACGGTGATGA TGGCTGATCA CGGCCTGCAT CGCTCGCCCA ATTCCGGCTG GCCGGAAGCG GCGGCGGCGG GTGGGCTGGA TGTGGCGCTG GCGGGACCGC GTATATATGC CGGAGACGTG GTCAACGAGC CAATGATGAA TGCCGCGGGC CAACGCGCCA TTGGTGGTGC GGATATCCGG CGCGGTCTTT TGCTGATTGA CGGAGCCTGG CGCATCGGTG TTGGCATTTT GCTACTGCTG ACCCTGTTGT GA
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Protein sequence | MMEAHLLILA LALVLDRVVG DPPWLWARLP HPVVVFGTCI SAFDRLLNRP ALADPLRKAG GVLTIVLLLM ASLGVGYGLH RLFAALGFIG FLLEIAVTAV FLAQKSLLDH VKAVADGLLH EGLAGGRRAV SMIVGRDPDV LDEAGVARAA LESLSENFAD GVVAPAFWYG VLGLPGLLAY KMLNTADSMI GHKSERYVQF GWASARLDDL ANWPAARLAG LLIVCAAGTG EGIATAKRCF TVMMADHGLH RSPNSGWPEA AAAGGLDVAL AGPRIYAGDV VNEPMMNAAG QRAIGGADIR RGLLLIDGAW RIGVGILLLL TLL
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