| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2560 |
|---|
| Symbol | |
|---|
| ID | 7385914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2112237 |
|---|
| End bp | 2113160 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643651656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549844 |
|---|
| Protein GI | 222148887 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2313] Uncharacterized enzyme involved in pigment biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.80027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTT CGATTTCTCC GCTCCTGCCC ATCGTATACG CCCGCGAAGT GGCTGCGGCC
AAGACGCGCA ATGCGCCTAT TGTCGCGCTG GAATCCACCA TTATCACCCA TGGCATGCCC
TATCCGAAAA ATGTCGAGAT GGCGCAAAGC GTGGAGGCAA TCATTCGCGA CGGTGGTGCG
GTCCCGGCGA CCATCGCCGT GATTGAAGGC GTTTTGCATA TCGGGCTGGA AGAAGATCAG
TTGCAAAAAC TGGCGCAAAT GACTGATGTC CTGAAGGTCT CTCGTGCCGA TCTCGCCTAC
GCCATTGCCG AACGCCGCAC CGGCGCTACC ACGGTAGCCG CGACGATGAT CGCTGCCGCC
CGCGCCAATA TCTCGGTTTT TGCCACCGGC GGCATCGGCG GCGTGCATCG TGGCGCAGAA
GAAAGCTTTG ACATTTCAGC GGACCTGGAA GAACTGGCCC GCACCCCTGT CATCGTCGTC
TGCGCCGGAG CAAAAGCTAT TCTTGATATT CCCAAGACAT TGGAAGTCCT GGAAACCCGT
GGCGTACCTG TCGTGACTTA CGACAGCGAC GAATTTCCAG CCTTCTGGTC GCGGGAATCG
GGCTTGAAAA GCCCACTTAA ACTGGAAAGC CCCGCAGCAA TTGCCAATTT CCAGAAGGTA
CGCGACCAAT TGGGCATTGA TGGCGGCATG TTGATCGCCA ATCCCGTGCC GGAAGCAGAG
GAAATCGCGC GCGAGGAGAT GGAAATCTAT ATTGGCCGGG CGCTGGCCGC GGCTGAACGC
GAGGAAATCA CTGGCAAAGC CGTCACGCCT TTCCTGCTCG ACGCAATCTA TCACCTCACC
GACGGCCGCA GCCTGACCAC CAATATCGCG TTGGTGGAAA ACAACGCGCG TCTTGCCGCG
GAAATTGCCG TCGCGATGCT GTAA
|
|---|
| Protein sequence | MTRSISPLLP IVYAREVAAA KTRNAPIVAL ESTIITHGMP YPKNVEMAQS VEAIIRDGGA
VPATIAVIEG VLHIGLEEDQ LQKLAQMTDV LKVSRADLAY AIAERRTGAT TVAATMIAAA
RANISVFATG GIGGVHRGAE ESFDISADLE ELARTPVIVV CAGAKAILDI PKTLEVLETR
GVPVVTYDSD EFPAFWSRES GLKSPLKLES PAAIANFQKV RDQLGIDGGM LIANPVPEAE
EIAREEMEIY IGRALAAAER EEITGKAVTP FLLDAIYHLT DGRSLTTNIA LVENNARLAA
EIAVAML
|
|---|
| |