Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2544 |
Symbol | fad |
ID | 7385901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2095849 |
End bp | 2096652 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643651644 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002549832 |
Protein GI | 222148875 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.715875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG CGCGGACCTT TGCGGACAAC GGCATTCGAG TGGCCGGACA AAATGGCATC GGCGCGCTGA TTATCGATAA TCCAACCCGC AAGAATGCGA TTACCCAGGC CATGTGGCGC GCCATTCCAC CGGCACTGGA CTGGCTGATT GCCGAGGCCG GGGTTCACTG CATCGTCATG ACAGGCGGCG GCCAGACGGA TTTCAGCGCT GGCGCCGACA TTTCCGAATT CGACGCCGTG CGCAATGACA GCCGTCAGGC GCGGATCTAC GAGGCTGATA ATAGCGCGGC TTTCTCGGCC ATTCGGGAAT CGCGGGTGCC TGTCATCGCT TCGCTTCGCG GGGTTTGCTA TGGTGGAGCC TTCGGGCTTG CCGCCGCTGC CGATCTCAGG ATCGCTGACG ACACCGCGAT CTTCGCCATA CCCGCAGCCC GCCTCGGCCT GGCCTATCCC GCGGATGCCG TTGCCGACCT CAGCCGGACG CTGGGCAGCC AGATCGCCCG GCGGGCACTG TTTACGGGTC AGGCGTTTCC TGCAGCTTCT CTGCTGAGCT GCGGCTTTCT GGGCGATCTC GTAGCCCCCC AATCCCTTGA TGGTGCTGCC TTTTCACTGG CAGAAACCAT CGCTGCCAAT GCGCCGCTGT CTATCCACGC TGCCAAGCTG GCGCTGCGGG CAACGGAAAG CCAGGACGAC AGCCTGCTGA GCGAGGCCGC TGTTCTTGGC TCAACCACGT TCGAAAGCGC CGACTACCGC GAAGGCCGCA CGGCCTTTCG CGAAAGGCGC CAACCGATCT TTACCGGAGA GTGA
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Protein sequence | MKKARTFADN GIRVAGQNGI GALIIDNPTR KNAITQAMWR AIPPALDWLI AEAGVHCIVM TGGGQTDFSA GADISEFDAV RNDSRQARIY EADNSAAFSA IRESRVPVIA SLRGVCYGGA FGLAAAADLR IADDTAIFAI PAARLGLAYP ADAVADLSRT LGSQIARRAL FTGQAFPAAS LLSCGFLGDL VAPQSLDGAA FSLAETIAAN APLSIHAAKL ALRATESQDD SLLSEAAVLG STTFESADYR EGRTAFRERR QPIFTGE
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