Gene Avi_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2539 
Symbol 
ID7385898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2093857 
End bp2094210 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID643651641 
Producthypothetical protein 
Protein accessionYP_002549829 
Protein GI222148872 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATT TCGAAGACGT GAACAAAAAG AGCAAAGAAG CCGTCGATAC GATGGTGAAG 
AATTATTCCG AGGTTGCCAA GGGCATGCAG TCGATCGCTG CTGAAGCCCA GGATTACTCG
AAAAAGTCCT TCCAGGATCT GGCCGGTTTC TTGGAGCAGC TGACCGCTGC CCGCAGCATC
GAAACCGTTT TCGAGTTGCA GACGAAATAT GCGAAGAGCT CCTACGAAAC CTTCGTGTCG
GAAGCCACCA AGATCACCGA AATGTATGCT GATCTGGCCA AGACGGCATA TAAGCCTTAT
GAGGCTCCGA TTGCCAAGGC TTCGAAAGCG GCGTCCGCCG CCACGGCTGC CTGA
 
Protein sequence
MLNFEDVNKK SKEAVDTMVK NYSEVAKGMQ SIAAEAQDYS KKSFQDLAGF LEQLTAARSI 
ETVFELQTKY AKSSYETFVS EATKITEMYA DLAKTAYKPY EAPIAKASKA ASAATAA