| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2379 |
|---|
| Symbol | |
|---|
| ID | 7386020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1947679 |
|---|
| End bp | 1948218 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643651513 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_002549702 |
|---|
| Protein GI | 222148745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3153] Predicted acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGA CACCCATCGG CGAGCCTTCT GACACGATCC ATATCGGTCC AGCTACAACG
CGGCATTTTT GCAATTTGCG AAATGTGGAA TTGGCCTCGT TCGAAACCCT TCGGGCTGCT
GGGGCCGTAA CAGGCGACCC TGCTGCAAGC AGCGACGAGG AATTGCAAGT GTATCTCGAT
GCCGGTCTGC TTCTGGCGGC TTTCGATGGA ACGGAGAGTT CGGTCGGATA TGCTGGGGGC
TATATCAGCG AGGGATGGCT GCACATAGGA GAAGTGGATG TTCATCCTGA ATGGCAGCGA
CAAGGAATTG GGCGGCGGCT CATAAACGCT CTGCTCACTG AAGGACGGAC CAGACATCTC
GTGGGTGCGA TGCTGACGAC GGACCGTTTC GCGCCTTTCA ACGCGCCCTT TTATTCTTCT
CTTGGGTTTC AAGCCATTGA GGGGGACGCC TGTCCCGTCC GGCTGAAAGA GATTCTTGCC
GCAGAAGCGG TAAAAGGCCT CAATCCACTT CGCCGCGTCG CCATGGTTCT GGTGTTTTAG
|
|---|
| Protein sequence | MMTTPIGEPS DTIHIGPATT RHFCNLRNVE LASFETLRAA GAVTGDPAAS SDEELQVYLD
AGLLLAAFDG TESSVGYAGG YISEGWLHIG EVDVHPEWQR QGIGRRLINA LLTEGRTRHL
VGAMLTTDRF APFNAPFYSS LGFQAIEGDA CPVRLKEILA AEAVKGLNPL RRVAMVLVF
|
|---|
| |