| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2288 |
|---|
| Symbol | |
|---|
| ID | 7388256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1878740 |
|---|
| End bp | 1879045 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643651455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549645 |
|---|
| Protein GI | 222148688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0685937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTA AGATTTACCG TCCTGCAAAA ACAGCCATGC AATCCGGAAA AGCAAAGACC
CATCTATGGG TTCTTGAATT CGATGCATCC GAACCTCGGA CGATCGACCC GATGATGGGC
TATACAAGCT CCGGCGACAT GCTCCAGCAG GTGAAGTTGA CGTTTGAAAC GCAGGAATTG
GCCGAAGCCT ACGCTCAGCG CAATGGAATC GATTACCGCG TCATCCAGCC AAAGGAACCA
CGCCGCCAGT CGGTTTCCTA CACAGACAAT TTCCGCTTCA GCCGCCTCCA GCCCTGGACG
CATTAA
|
|---|
| Protein sequence | MSAKIYRPAK TAMQSGKAKT HLWVLEFDAS EPRTIDPMMG YTSSGDMLQQ VKLTFETQEL
AEAYAQRNGI DYRVIQPKEP RRQSVSYTDN FRFSRLQPWT H
|
|---|
| |