| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2239 |
|---|
| Symbol | |
|---|
| ID | 7386340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1838036 |
|---|
| End bp | 1844794 |
|---|
| Gene Length | 6759 bp |
|---|
| Protein Length | 2252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643651417 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549611 |
|---|
| Protein GI | 222148654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCA AAAAGACAAG CGAGTCGATT GACGATAGCG CTTTCCAGGC CCTCGAGGCA
GCCCTGAGGA TCGACTTCGA GGAAGAAGAC GATACGCCAG TGCGTGGCCC CGCGCCTGTA
GCGGCGGAGG CAAAAGTGTC CGACACACCG AGACAGACCA GGCCTGCACC ACGGACCTCC
GCGCCGCAAG CGGATACGAC AGCCAATGAA AAAGAGCGGC TGCGGGCCGC GGCCCAGGCA
AAAGCTGCCA AGGCTCCAAA GCCTGCTTCC GCTACGACCG CCGATCCTGC GCCTAAGTCC
CCTTCCCTTG CCCCTGCCAA CGATGCGTCC CGCCGCAGCT CATCCGCCGT GTTGAAATCG
CTTGATGCCG GATCGATGGG CGGCGCGTTG CGCAATGCCA CCATCGTTTC GATTCTCTGG
GGCGCCGGTG GCCTGGCTCT GTCGCAATTG CTCTATGGCT CCCAGATCTG GAGCGGCGGC
GCTGCCGCCA TTTTCGCCAA TCCGGGCATT ATCGCTATTC TCGTTGGCAC TGTCCTGCCA
ATCTTCGTGT TCTTTTCCTT CGCCATCATG ATGTCGCGGG CGCAGGACAT GCGCAATGCC
GCCCGCTCCA TGGCAGAAGT CGCCTTGCGG CTGTCCGAGC CGGAAACCGT CGCCTCCGAG
CGTATCATGT CGGTCGGCCA GGCCGTGCGC CGCGAAGTCT CGGCGATGAA CGAGGGCATT
GAGCGCACCA TCGCCCGCGC CACCGAGCTG GAAACCCTGG TTCATTCCGA GGTGACGGCG
CTGGAGCGCA GCTATACCGA TAACGAGCTT CGGGTTCGCA GCCTGGTTCA GGAATTGTCG
GCGGAACGTG ACGCCATCGT CAACCACGCC GACCGCATCC GCTCCTCCAT CGTGGGTGCT
CATGACCAGT TGAAGGAAGA TCTGTCGCTG GCGACAGAGG AAATAGGCAT CCGACTGGCG
ACATCAGGCG AGGCTTTTGC CTCGATGATC GACATGCGTG CCGCAACGAT CATGGAGAAA
TCCAACACCG CCGCCACAAC GCTCGGATCG CTGCTGACCG CCAAGACCGA CGAAATGGTC
CAGACTCTGG GTGCCGCCGG ATTCTCGCTG TCGAGCGAAT TTGATAACCG TTTGCAGGCC
CTCACCGGCT CCATGTCGAC CCATGGCGAA GAAATCCTGC GCCAGTTTGA AACCCGCGCC
TCGACGCTTG ACGCCAACAC AGAAAAGCTC AATGCGGCAC TGAACGATCG CGCTCGCCAG
TTGAACGAAA CGCTGGTCGC CCGCACCCGT GAAATCGCCC AGAGCTTCAC CCAGGGCGAA
GCATCGATCA GCGGCAGCCT GGATAGCGCG CTGACACGCC TCAACACCTC TCTCGAAGAG
AAATCGGTTT CCTTCCGCCA GAGCCTGCAA ACCAATGCCG AAGACGCGCT TGTTGATATC
GACATCCGCT CCGGCCTGTT TGAAGACCGG ATGCAGGCGA CGATTGGCCA GATCAACGCC
ACGTTCGACG ACAGGATGAC CGAATTCGCC ACTGCTTTCG ATCAGCGCGC CGGCACGCTC
GACAGCAAGC TGAACGAAAG CCTGCTGCGC ATCAACGAAA CCATGGCGGG TGGCTCGGAA
ACGATTGATG GCATCCTGAC CACCTCGATC GACCGCCTCG GCAATACGAT GACCGACCAG
TCTTTCGCGC TGGCCGCAAC CCTTGGCGGC AACCAGGAAG CGTTGACCGA AGCCCTTTCC
AGCCATTCGC GGGAACTGGC GGACGCCCTG GAGCGGCGCC GCCGCGAACT GGACGAAACG
ATTTCCAACG CCCAGAGCCG CATCGACCAG ATCATGGCCG AACGTGGCAC AGCCTTGACC
GAAGCCCTCA ACACCAGCCA GACCCGTTTT GACGAAACGC TGGGCAGCCG CTCGGAAGCG
GTGATCAACC AGCTCACCGG CAGCCATGAT CGCATTTCCG ACCTACTGCA AAATGCCTCT
TCCGGCATTG TCGAAGCTGT CACCTCCTCC GAAACCCGTC TTGCTAACAC GCTGGACCGC
AAGGCACAGA CGATCATTGA GGCCGCCGAT GGTGCCGACG CCCGTATTGA GGCCGCCCTC
AGCGACAAGG CCGATGCGAT CCGCGCCGCC TATGAAACAA ACCATGAGCG GTTGACATCG
GTTCTCGATG CCAAGGTCGA GCAACTCGAA CAGACGGCCT TGGCCGTCGA TAGCCGTGTC
GAGGCTGCTT TCGGCAACAA GGCAGATGCG ATCCGTGCGG CCTATGAAGA AAGCGAAGCG
CGCCTTACCC GTACGCTCGA CGGCAAGGTT GACCAGATCA CCGATGCAGC GACCGAGGCC
GATATGCGCA TCGAACTTGC GCTCGGCAAC CGCATGGACA CGATCCGCGC CGTCTATGAA
GACAGCGAAA GCCGTTTGGC CAGCACAATC GATGCAAAGC TTGGCGCTCT GACCGAGACA
CTCGGGAATG CCGATAACCG CATTGAACAG GCGTTTGGCA CCAAGGCCGA TCAGGTTCTC
TCCGCCTATG AGCAAAGCGA AGCGCGCCTT GCCCGCACAC TCGACAGCAA GATTGACCAG
ATCAGCGACG CTGCCTCTGA TGCCGACATG CGCATTGAAC TGGCGCTCGG CAACCGTATG
GACACGATCC GCGCCGTCTA CGAGGAGAGT GAAAGCCGCC TTTCAAACAC CATTGATGCC
AAGCTTGGTG CCCTGACCGA GACGCTTGGC AATGCAGACG TTCGCATCGA ACAGGCGTTC
GGCACCAAGG CCGATCAGGT TCTCTCGGCC TATGAGCAAA GCGAAGCGCG CCTTGCCCGC
ACGCTCGACA GCAAGATCGA GCAAATCAGC GACGCTGCCT CTGATGCCGA CATGCGCATT
GAGCTGGCGC TCGGCAATCG CATGGACACG ATCCGCGCCG TCTACGAGGA GAGCGAAACG
CGCCTTTCCG GCACAATCGA TGCCAAGCTC GGCGCTCTGA CCGAGACACT CGGAACTGCC
GATAGCCGTA TCGAGCAAGC CTTCGGCTCC AAGGCTGACC AGCTCCGCGC CGTCTACGAA
GAGGGCCAGG CCCGCCTTAC ACAGACCCTT GACAGTAAGG TCGACCAACT CAGCGATGTG
GCGGCAGAAG CCGATATGCG CATCGAGTTT GCACTGGGCA GCAAGGTCGA TTCGATCCGC
TCTGTCTATG AAGATAGCGA AGCGAGACTG GCTGGAACCA TTGACGCCAA ACTTGGCCAG
TTGATCGAAA CCGTCGGTTT TGCCGATAGC CGTGTCCAGC AGGCACTTGG ATCCAAGGCC
GACCAGATCC GTGAAGCCTA TGAGGCAAAT CACGGTCGTC TGGCCGAAAT GCTCGACAGC
CGTATCAATC AGGTCATGGA TACCGCCACG GAAGCCGATC TGCGGATGGC GCTCGCCTTC
GGCAACAAGG CTGATGATAT CAGGGCCGCC TATGAAGAAA ACCAGGGCCG TCTTGAGCAG
TCACTGGAAG CCCATTCCAG CCGTTTGACG GAAACGCTTG GCCAATCCAC AGACCGCGTC
GAGCAGGTCT TTGGCCGCTC GACCGACCGG GTTGAGCAAG TCTTGGGGTC TGGCGTCTCG
CGGATCGAGA GTGACATTAC CGGCAGTGTT TCGCGGCTGG AAACCACCTT TGAAGACAAT
CACAATCGCC TGCGCCAGAC GCTGGACGAG CGTGGCAATG CTATCACCAA TGCCTTGCAG
AATGCCCGGA GCGGATTGGA AGAAACCCTC AACGAACAGG GCATGGCCAT CGGCGCCTCG
ATCGCCGCCA GCGCCGGCAT GCTGGAAATG TCGCTGGAAG AGCAGCAGGA CAATCTGCGC
TCCACCATCG ACGCTTCAAG CCGTGATCTT CAGGACAGGC TGCGCGGTTC GGCTGGTGCC
ATCGCCGGAG AATTCGGTCA GGCTGCCCGC GAAATCAGCC GCACGGCAGA AGAGTTCTCC
ACACGGGTCG AAGGCTCGCT GGACGGCGTC GCCAACCGGT TGTCCGAAAC CGGCGCCCGG
ATCGAGACCA GCCTCGGCAG TCTCGAACAG CGTATTCAGG GCAGCCTCGA AGGCGTCGAC
CTCAAGGTCA GCAATGCCGG TGACAATGTT GCCGCCAAAC TCTCCGAAAA AGTCTCCGAT
CTGGAGCGCG TCACCACGGA TGCAACCCAG CGTATCGAGC AGACACTCGG CGATGCCACG
CAGCGTGTTG CCGACACATT TGATAGCCGC ACGTCTGTTA TCGATGAGCG CCTGTCGACC
ATGGACCGCG CGCTGAATAT CGGCTTGCAG AATGTGAACA ACACCATCGA GGGCAAGGCC
GCAGGTCTCG CCTCATCGTT GCGCGAAGCC GTTATCGGTG CCACCCGTGA GATCGACAGC
GAGGCGCAGA AATCCGCCGA ATTGCTGGGC CGGACCGGCC AGGAATTCTC CGAGACCATG
AATGCCCGCA ATGAGGAATT CACCCGTTCG GTTCGCGAAC AGGCGGAAGA CCTGACACGC
CGGATCTCCG ACACCCAGAA CCGGCTTGCC GGTCAGGGCG CTCAGATTGC ACAGAGCTTC
TCGGATGCTG GCGATGCCAT CGTCAGCAAG GTTTCGGCAG CCGAGGCCAC CATCACTGCC
AAGGCGGGAG CCATCGCTGG CACGTTGACC GACGCCGAAA AGGCCCTGGA AGAACGTGCC
ACGGCGATCC GCGCTGCACT GTCGGCAACG ACTGGCGACA TGACCGAGGC CCTCGACAGC
GTCGACAAGG CGCTGGACGC CCGTGGCAAT GCCATCCGCA CCACGTTGGA CGAGCGCACC
CGCGAGCTGA ATTCGATGCT CTCAGGCCGC ACGTCGGAAT TGGCTCGCCT TATCGAGGAA
AAAGCCAAGC CGACCGTCGA GCAATACGCC CAGGTTGGCC GCGATGCCGT CGAACGGATC
GCCCAGGCCG CCGACCAGAG TGCCCATAGC TTGCGCCAGG AAAATGCCAA GCTGGCCGAT
GCTCTGGCAG CCCGTGCCGC CGAAGCCGCC CGCCAGATGA ATGCTGCGGA AAACAGCCTG
ACATCCAGCG CTGGCGAGAT GATTGACCGC ATCAGCGAAA CCAACCAGAC GCTGCACGCC
GTCGTCGAAC AGGCAGCCCA GTCCATGGCC AATGCTGACC GCCAGTTTGG CGCAACGACC
GACCGCCTGG CCGCGACCAC CCACAAGGCC GCCGATGTCT TGGCGACGTC TGGCCGGTTG
CTGGAAAGCA ATCTGGAACG GTTGTCGAAT GTCTCCAACC AGGCTCTGTC TCAGGTGACG
GGCATTGTCG GCCGGTTCGG CGATCATGCG AAAGTGCTTG GCCAGGCATC CGAATTGCTC
GGCGCGGCGC AGTCCAACCT TGCAGGCACG CTCGAGGAGC GTCAGCAGGC TCTGCGCGAC
CTCTCCATCG GCATCGTCAA GCGGTCGGAA GAGATCGAGA ATACCATGAA GTCGCTGGCC
GGCATGGTCG ATGGCGCCTT CAGCCAGGCT GAGCAGCGCT CCAGCCAGGT AGCCGGAAAC
CTGCGTCAGG GGATTGAGAC ATCCTTTGCG GATATCGGCC AGATCCTCGG AGAGACCGAA
CAGAAGGCCA AGTCCGCCGC TGGCTCCATG CGCGATTCAC TTCTCTCGGC TGGTGAAGAT
GCCACCCGTG CCATCGAACG CACCTTGGGT GACGCGGAAA AGCGCTCCAG CGAGCTGGCA
AACCGCCTGC GCGGTGGCCT GTCATCGTCG CTTGCCGATG TGGACCGCAT CCTGACTGAG
GCCGGTCAGA AATCGGATGG CACGGCCAAC CAGATGCGCG AAGCAGTGCG TTCGGCTGTC
GAGGATGCTC TTGGCCGCTT CTCTGGCGCC ACCGACGAGA TCCGCCGCTC GGCCCAGGAA
ATCCGCCAGG AACTTGACCT GACCCGGACA GAACTGAAGC GTGGTGCCTT CGACCTGCCG
GAAGAAGCCA AGGAAAGCGC CGGTGCTATG CGTCGTGCCG TTGCCGAGCA GATCAAGGCG
TTGCAGGACA TTTCCCAGCT GGTTGGCCGC AGCGCCCAGC AGCTTGAAAT TTCCACGCCA
ACGCCTCGTG CCGCCGCCAC TGCTGCTGTT CAGCCACAAC CGGCTCGCCC AGCGCCGACG
GTTCAGGCCC AGGCTCCAGC CTCACAGCCC GCGCCAGCTC CTGTCCCTGC CCGTCCGGCA
ATTTCGGCAG CGCCAGCCCC TCAGCAAACC CCACGCCCTG CCGCCAACCC GCTTGGCCTG
CGTGGGAGCC TGCAAAGCGA ACAGCCAGCA CCGGCTGCGG GCGAAGTCTC CGGCGGCTGG
ATCAGCGACC TCTTGCGAGG AGCATCACGT GAGGAGCAGA CGATCACTTC GCCTGCCCGT
GCTGCACGCC CGGCAGCGGA AGCACCGCGC AGCAATGACA GCCGCAACCC CCGCCATATG
GTGGAATCAC TGAATTCGCT TTCGGTCGAT ATTGCACGGG CCATCGATCA CGATGCCTCG
GTCGATCTAT GGCGTCGCTA CCAGCGCGGC GAGCGTGACG TCTTTACCCG TCGCCTCTAC
ACGCTGAAGG GCCAGCAGAC CTTTGATGAA ATCAAGCGTA AATACGACCG CGAACCGGAA
TTCCGCACCG CCGTCGACCG TTATATCGCC GATTTCGAAA AGCTGCTGTC CGACGTGGCG
CGCACCGACC GGGACAAGTC GATCACCCAG TCCTACCTGA CGTCCGATAC TGGCAAGGTT
TATACCATGC TCGCACATGC AGCAGGCCGG TTTAGCTGA
|
|---|
| Protein sequence | MATKKTSESI DDSAFQALEA ALRIDFEEED DTPVRGPAPV AAEAKVSDTP RQTRPAPRTS
APQADTTANE KERLRAAAQA KAAKAPKPAS ATTADPAPKS PSLAPANDAS RRSSSAVLKS
LDAGSMGGAL RNATIVSILW GAGGLALSQL LYGSQIWSGG AAAIFANPGI IAILVGTVLP
IFVFFSFAIM MSRAQDMRNA ARSMAEVALR LSEPETVASE RIMSVGQAVR REVSAMNEGI
ERTIARATEL ETLVHSEVTA LERSYTDNEL RVRSLVQELS AERDAIVNHA DRIRSSIVGA
HDQLKEDLSL ATEEIGIRLA TSGEAFASMI DMRAATIMEK SNTAATTLGS LLTAKTDEMV
QTLGAAGFSL SSEFDNRLQA LTGSMSTHGE EILRQFETRA STLDANTEKL NAALNDRARQ
LNETLVARTR EIAQSFTQGE ASISGSLDSA LTRLNTSLEE KSVSFRQSLQ TNAEDALVDI
DIRSGLFEDR MQATIGQINA TFDDRMTEFA TAFDQRAGTL DSKLNESLLR INETMAGGSE
TIDGILTTSI DRLGNTMTDQ SFALAATLGG NQEALTEALS SHSRELADAL ERRRRELDET
ISNAQSRIDQ IMAERGTALT EALNTSQTRF DETLGSRSEA VINQLTGSHD RISDLLQNAS
SGIVEAVTSS ETRLANTLDR KAQTIIEAAD GADARIEAAL SDKADAIRAA YETNHERLTS
VLDAKVEQLE QTALAVDSRV EAAFGNKADA IRAAYEESEA RLTRTLDGKV DQITDAATEA
DMRIELALGN RMDTIRAVYE DSESRLASTI DAKLGALTET LGNADNRIEQ AFGTKADQVL
SAYEQSEARL ARTLDSKIDQ ISDAASDADM RIELALGNRM DTIRAVYEES ESRLSNTIDA
KLGALTETLG NADVRIEQAF GTKADQVLSA YEQSEARLAR TLDSKIEQIS DAASDADMRI
ELALGNRMDT IRAVYEESET RLSGTIDAKL GALTETLGTA DSRIEQAFGS KADQLRAVYE
EGQARLTQTL DSKVDQLSDV AAEADMRIEF ALGSKVDSIR SVYEDSEARL AGTIDAKLGQ
LIETVGFADS RVQQALGSKA DQIREAYEAN HGRLAEMLDS RINQVMDTAT EADLRMALAF
GNKADDIRAA YEENQGRLEQ SLEAHSSRLT ETLGQSTDRV EQVFGRSTDR VEQVLGSGVS
RIESDITGSV SRLETTFEDN HNRLRQTLDE RGNAITNALQ NARSGLEETL NEQGMAIGAS
IAASAGMLEM SLEEQQDNLR STIDASSRDL QDRLRGSAGA IAGEFGQAAR EISRTAEEFS
TRVEGSLDGV ANRLSETGAR IETSLGSLEQ RIQGSLEGVD LKVSNAGDNV AAKLSEKVSD
LERVTTDATQ RIEQTLGDAT QRVADTFDSR TSVIDERLST MDRALNIGLQ NVNNTIEGKA
AGLASSLREA VIGATREIDS EAQKSAELLG RTGQEFSETM NARNEEFTRS VREQAEDLTR
RISDTQNRLA GQGAQIAQSF SDAGDAIVSK VSAAEATITA KAGAIAGTLT DAEKALEERA
TAIRAALSAT TGDMTEALDS VDKALDARGN AIRTTLDERT RELNSMLSGR TSELARLIEE
KAKPTVEQYA QVGRDAVERI AQAADQSAHS LRQENAKLAD ALAARAAEAA RQMNAAENSL
TSSAGEMIDR ISETNQTLHA VVEQAAQSMA NADRQFGATT DRLAATTHKA ADVLATSGRL
LESNLERLSN VSNQALSQVT GIVGRFGDHA KVLGQASELL GAAQSNLAGT LEERQQALRD
LSIGIVKRSE EIENTMKSLA GMVDGAFSQA EQRSSQVAGN LRQGIETSFA DIGQILGETE
QKAKSAAGSM RDSLLSAGED ATRAIERTLG DAEKRSSELA NRLRGGLSSS LADVDRILTE
AGQKSDGTAN QMREAVRSAV EDALGRFSGA TDEIRRSAQE IRQELDLTRT ELKRGAFDLP
EEAKESAGAM RRAVAEQIKA LQDISQLVGR SAQQLEISTP TPRAAATAAV QPQPARPAPT
VQAQAPASQP APAPVPARPA ISAAPAPQQT PRPAANPLGL RGSLQSEQPA PAAGEVSGGW
ISDLLRGASR EEQTITSPAR AARPAAEAPR SNDSRNPRHM VESLNSLSVD IARAIDHDAS
VDLWRRYQRG ERDVFTRRLY TLKGQQTFDE IKRKYDREPE FRTAVDRYIA DFEKLLSDVA
RTDRDKSITQ SYLTSDTGKV YTMLAHAAGR FS
|
|---|
| |