Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2160 |
Symbol | |
ID | 7387876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1773428 |
End bp | 1774246 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651356 |
Product | metal dependent hydrolase |
Protein accession | YP_002549551 |
Protein GI | 222148594 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.735165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTATC TCCGCCGCTT CACCATTCTG GGATGTTCAT CCTCGCCGGG CGTGCCGCGG ATCAATGGTG ACTGGGGAGA TTGCGATCCG TTAAACCCGA AAAACAGGCG CACACGCGCG TCTTTCCTGA TCGAGCAGAT CAGCCCGGAT GGCGGCAAGA CCGTGGTTCT AGTCGATACT GGCCCGGATT TTCGTGAGCA GATGATCCGT GCGGGTGTCC AATCCCTGGA CGCCGTCGTC TATAGCCACG CCCATGCCGA CCACTTGCAT GGCATCGACG ACCTGCGCGG CTATTCCTTG ATGCAGCGCG GACGCATTCC GATCTATGCC GAGCCGGAGA CCATGCGCCG GATAGAGACG GGGTTCGGTT ACTGCCTGAA GACCCCTGAT GGTAGCAATT ATCCACCCAT CGTGCGTCCC CATATCATCG AGGACATGGA CAGTCTGATT GAGATTGATG GCGCAGGCGG GCGCATTGCG CTCATGCCGC TGGAACAGCA GCATGGCGAC ATTATTTCAC TCGGCTTTCG CATCGGTGAT GTCGCCTATT GCAGCGATGT CAGCGATTTT CCGGAAAAAA CCGTGCCGCG TCTGGCTGGG CTGGATGTGC TGGTTATCGA TGCCCTGCAA TATAGAGAGC ATCCGAGCCA TTTGTCCCTG TCGCAATCGC TGGCCTGGAT CGACAGGCTT GCCCCAAAGC GGGCGATATT GACCCATATG CATATTCCAC TCGATTACGA GACCGTCCTG CGCGAAACGC CTGATCATGT CGAGCCGGCG TATGACCAGA TGCAATTTGA GCTCACGCTG CCGGCCTGA
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Protein sequence | MTYLRRFTIL GCSSSPGVPR INGDWGDCDP LNPKNRRTRA SFLIEQISPD GGKTVVLVDT GPDFREQMIR AGVQSLDAVV YSHAHADHLH GIDDLRGYSL MQRGRIPIYA EPETMRRIET GFGYCLKTPD GSNYPPIVRP HIIEDMDSLI EIDGAGGRIA LMPLEQQHGD IISLGFRIGD VAYCSDVSDF PEKTVPRLAG LDVLVIDALQ YREHPSHLSL SQSLAWIDRL APKRAILTHM HIPLDYETVL RETPDHVEPA YDQMQFELTL PA
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