Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2101 |
Symbol | |
ID | 7386902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1725811 |
End bp | 1727010 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651311 |
Product | hydrolase |
Protein accession | YP_002549506 |
Protein GI | 222148549 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA CTCTCGTCGT TTTCAATGCC CGCAATGGTC TCGGTGATCC CGTTGATATC GTTATTGCCG GTCATGCCAT TGCCGCTATC GGCCCAGCGG CGGGTGAGGG CGTTTCAACG GAAAAACCGC GCATCGATGC TCGAGGCGGT CTGGTCCTGC CGGGCCTGGT CGATGGTCAT GTACATCTGG ATAAAACGCT GATCGGCATG CCGTTCATTC CCCATATTCC CGGAGGCACG GTCGCCGAGC GGATCCGGGC CGAAAAAGCG CTCCGCCGCT CGCTGCCTTT GCCGGTCGAG GTGCGTGGGG CTAAGCTGCT GGAGAAGATG GCCACCTATG GCACCGTCGC CTGCCGTAGC CATGCCGATA TCGATACGGA AGTCGGGTTG GCAGGGCTAG AAGCCATATT GTCCCTGAAG CAAAGCCATG CTCATCTGGT CGATATTCAG ACAGTGGCGT TTCCACAGTC CGGCGTGCTG GCCGATCCCG GCACTGCTGA TCTGCTGGAG CAGGCGGTCA AGGCGGGTGC GGACCTGATC GGTGGTCTTG ATCCAGCCGG GATCGACGAT GACATTACCG GCCACCTGAA CGCGATTTTT GCTATCGCCG GACGTCACGG CGTGGGGGTG GATCTGCATC TACACGATCC GGGCCCGCTC GGCGCGTTCG AAATCCGCCA GATCGCCAAA CGGGCTTTGG CGCAGGGACT GCAAGGCAAA TGCGCCGTCA GCCATGCCTA TTGCCTGGGC GCTCTGGATG ATATGGATTT CGGGCGCACA GCGGAAGCGC TGGCGCGCGC CGATGTGGCG ATCATGACCA CCGGCCCCGG CGATACCAGC ATGCCGCCGA TCAAGCGGCT GAAAGCTGCG GGCGTGCGGG TGTTTTCCGG CAATGACAAT ATCCGCGATG CCTGGTCGCC GCTCGGCAAT GGCGATCTTT TGGAGCGGGC GAGCATTCTC TGCGACCGGC AGAACTTTCG CGCCGATGCC GACCTTGAAC ATGCTTTCGC GCTTGTCAGT ACCCTCTCGG CTGAGGTTTT AGGACGCAGC AATGCGACAC TCGGCAAAGG GTGTCCCGCC GATTTCATCA TTCTGCCGGT TGCCTCGATT GCCGAAGCAG TGGCGGCGCG TCCGATGGAG CGTATGGTGT TCAAGGCAGG TGTGCTGGTT GCCAGCAATG GCAATCTCGT CGCCTCATGA
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Protein sequence | MSATLVVFNA RNGLGDPVDI VIAGHAIAAI GPAAGEGVST EKPRIDARGG LVLPGLVDGH VHLDKTLIGM PFIPHIPGGT VAERIRAEKA LRRSLPLPVE VRGAKLLEKM ATYGTVACRS HADIDTEVGL AGLEAILSLK QSHAHLVDIQ TVAFPQSGVL ADPGTADLLE QAVKAGADLI GGLDPAGIDD DITGHLNAIF AIAGRHGVGV DLHLHDPGPL GAFEIRQIAK RALAQGLQGK CAVSHAYCLG ALDDMDFGRT AEALARADVA IMTTGPGDTS MPPIKRLKAA GVRVFSGNDN IRDAWSPLGN GDLLERASIL CDRQNFRADA DLEHAFALVS TLSAEVLGRS NATLGKGCPA DFIILPVASI AEAVAARPME RMVFKAGVLV ASNGNLVAS
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