| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2041 |
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| Symbol | tolB |
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| ID | 7386858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1676270 |
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| End bp | 1677103 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651266 |
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| Product | periplasmic component of the Tol biopolymer transport system |
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| Protein accession | YP_002549462 |
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| Protein GI | 222148505 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.365131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGCT CTGTGGAGAT CTACAACATC GAGACCCGGC AGAGCCGTAT TGTCTGGCAA
ACGGAACGGC TGGTGGAGGC GCCGAACTGG TCGCGAGATG GCCAGTTCCT GATCTTCAAT
GATGACGGGT TGATGTATCG CCTGCCTCTG GTCGGGCAGT CGGTGCCGGA AAAGATCGAC
ACCGGCTTTG CCACCCAATG CAACAATGAC CACGGGCTTT CGCCGGATGG CCAATGGCTG
GCGATCTGCG ACAAGGTGGA GCACGGCAAA ACCTGCCTCT ACATCCTGCC AGCCAAAGGC
GGCACGCCGA TCCAGATCAC CGAAAACCTG CCCTCCTACT GGCATGGCTG GTCGCCGGAT
GGCCAACGGG TCTGCTATTG CGGTATCCGT GACCAGGTCT TCGACATCTA TACGATCTCG
GTTGATGGCA GCGACGAGCA GCGCCTTACC CATGGCGAAG GCCGCAATGA TGGGCCGGAC
TGGTCGGCGG ATGGGGAATG GATTTATTTT AACTCCAGCC GCAGCGGCAC GATGCAGATC
TGGCGTATTC GCCCGGATGG CAGGGATGTG CAGCGCCTGA CCGATGACGG GCAGGGCGAC
TGGTTTCCGC ATCCATGCCC CAATAACCGC AAGTTGGTGT TCATTTCCTA TGACGCCGAT
GTGTTCGACC ACCCACGCGA TCTCCATGTG CGCATGCGCC TGATGGACAT GGACGGCGGC
AATGTTGAAA CCCTGTTCGA ACTATTTGGC GGGCAGGGGA CGATCAATGT GCCAAGCTGG
TCGCCGGACG GTCAGGAATT CGCCTATGTG CGATATTTTC CGGCGACCGC CTAA
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| Protein sequence | MRSSVEIYNI ETRQSRIVWQ TERLVEAPNW SRDGQFLIFN DDGLMYRLPL VGQSVPEKID
TGFATQCNND HGLSPDGQWL AICDKVEHGK TCLYILPAKG GTPIQITENL PSYWHGWSPD
GQRVCYCGIR DQVFDIYTIS VDGSDEQRLT HGEGRNDGPD WSADGEWIYF NSSRSGTMQI
WRIRPDGRDV QRLTDDGQGD WFPHPCPNNR KLVFISYDAD VFDHPRDLHV RMRLMDMDGG
NVETLFELFG GQGTINVPSW SPDGQEFAYV RYFPATA
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