| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1994 |
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| Symbol | |
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| ID | 7387269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1638261 |
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| End bp | 1642955 |
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| Gene Length | 4695 bp |
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| Protein Length | 1564 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651232 |
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| Product | phage tail fiber protein |
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| Protein accession | YP_002549428 |
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| Protein GI | 222148471 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.38979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATGA GGCATGGGCC AAATCCATTG GCTGCGTCTC CATCGGCATG GCGGCGCTTG
CCACCAACGA TGTGTCGAGC CTCTACGCGC GGCGCGGTTA TACGCCCGCT GAGACGCATT
TTATCAAACC CATCTAAGGG TATCCCATCC ATGGCAATCT TTTCTGGCAT CGCCGCCTTT
GTCAGCGGTG TGGCGTCGGC GCTTGGCGCG GTCTCGACCT TTATCGGCGG TATGGGCGTT
ATCGGCTCGA CGCTGTTGAA GGCCGCCGTC GGCGTTGGTT TGAACTATCT GGCCTCGGCT
GTGGCGGGCA AGAGCAAGGC TTCCACGGCA AGCTTTGCCG TCAATGGGCA ATTGCAGTCC
GGTGGCACCG TGCCGCGCTC GATCATTTTT GGGATGACGG CCACGGCTGG ATCTCTTGTC
TATGCCAATA CCTGGGGCAA TGCGGGCAAG ACACCGAATG CCTATGTCAC GCAGGTCATT
GCGCTGGCCG ATGCGCCGAT CAAGTCGCTG CTGGTGGCAG TGGTCAATGG CGTGGCCTGC
GAGATCGATT TCGATCATCC GCATGCCGAA TACGGTTGGC CGGTTGTCGA TTACCGCAAG
GGCAATACTG ATTACCTCTG GCTCAAATTT TACGATGGCA CGCAGACTGA AGCGGATAGC
TTTCTGGTCA ACCGGGTCTC GTCCACGGCC CGCCCTTACG AGAATACCCG CGTCGGCCAT
GGCGTTGCCT ATGTGATCGC CACCTCGCGC GTGAACCAGG AGCTGTTTTC CGGCTTTCCG
TCCTTCAAGT TTGTGCTGGA TGGTATGCGG CTTTACGATC CATCCAAGGA TAGCTCGGTT
GGCGGCAATG GTGCACAGCG CTGGAGCGAC GCCTCGACCT GGGGCGGCGA TGGCGACCGC
CTGCCTGTTG TCCAGCTCTA TGCCCTGATG CGCGGTATCC GCTGGAACGG TCAATGGCTC
TATGGCCTCC AGACCGTCAC CGAACGGCGC TTGCCTGCCA GCCACTGGAT TGCCCAGATC
GGAAAATGCC GCACCCTGAT TGAAGGTGCC GATGGCATGG AGGCCACCTA TCGCTCTGGT
GCTGAGGTGC AGGTCAGTGC TGCCTTGCAG GATGCGGCAC AAGCGATGCT AACCGCCTGC
AACGGGCGGC TTGCTGAGAT CGGCGGCACC TATAAGCCGT TTATCGGCGT GTCGGACGAA
CCGGTCATGA CCTTTGCCGA TGCGGATATT CTATCCACGG AAGAGCAGAG CTTTACGCCG
TTCTTCGGCC TGTCCGATAC GGTCAACGGG ATTTCCGCGT CTTATCCATC GCCGGATGAT
AGCTGGAACA TGACGGAAGC GCCGCCGCTC TATAACGGCG ATTATGAGGT GGAAGACGGC
AACCGGCGTC TGTTGTCGGA TGTCAGTCTC GATTTTGTGC CTTACGCTGG ACAGGTGCAA
CGGCTCATGC AATCGGCCCT GAAGGAAGCC CGCCGCGCCC GTCGTCACAC CATTTCCATG
CCGCCAATGT TTGGGGCATT GGAGCCGGGG GACATTGTCG CCACGTCCAG CAACCGTAAT
GGCTATGTCG AGAAGCGGTT TCGGGTCGAT GGTGTTCTCG ATCAGCCTAA CCTTGATGTT
GTCCTCGATA TCACGGAAGT CGATCCGGCT GACTATGATT GGAATCAGGG GAGCGATTAT
AAACCACCGG TCACCGGCAG TGTGTCCAGC GGCGTGCCTG CTGCGCAGTC CACGACGGGC
TGGAGCGTTG TCGCGGGATC TGTCACCGAT AGCGACAGCC AGGATCGCAG GCCCGCCATT
GTTGTTTCTT GCACCGCCGA TCTGGATGAT GTGGCGCGGA TTTGGGTCAA GGTGCGCGTC
AAAGCCACGG GCGTTGTTGT TTATGACAGC GATGCCCATC CTTATGCTGG CGCTGCGACC
TGGACGCTGT CTGGTGCCTG GTGCCTGGCG CTGACGGAAT ATGAGCTGCA GGGCAAGTTG
GTGCCGGTGT CCAGCCGGGA AACAGTCGCA TCCGACTGGC TTTCCGTCAC CACGCTGAAC
CTGTCGGAAT CAACTGACGT TCTCGACAAC TCCATCACCA CGGCCAAGCT TGCCGACGCT
GCGGTGACGG CGTCCAAGAT CATGGATGAG GCGGTCACCA ATCTGAAGCT GGCGGATGCG
GCTGTCAGCA CGGCCAAGCT TCAGGTTGCT GCTGTGACGC AGGAGGTTCT GGCAAACAAC
TCTGTCATTG CCACGAAGCT TGCTGATGCG GCGGTCACCG GGGCAAAGCT CGCGGCCCAG
GCGGTCGATG CGACCAAGTT TGCGGCCAGC ATTGAGCCAG TGCGCGTTGT CACCCAACTG
CCGACCAGCC GCGTGTCTGC CTATGTCACC TTCAATGGCG AGGCCTATCG CTGGAACGGT
GCGGCTTATG TGAAGACGGT GTCCACGGCT GAATTGACCG GGCAGTTGAT CGGCTCGCAG
ATCGCAGACC TTGCGATTGT CGCTTCCAAG ATCGCCGACG GCATTATCAC CGGGACCAAG
CTTGCCGCTG ACACCATCGG TGCAAATAAC CTGGCTGCTA ACTCCGTCAC GGCCAAGCAA
TTGGTGCTGA CGGATTTCAC GAACCTTGTC CCTGATAACC AGATGCAGGA TTTTGGCAGT
TCCTGGTCTG GAGCGGGGTG GTCATCCTGG ACGGATCCCT ATCTTGGCGG CATGGCCTCG
CGGTCGCAGA TGAAGTTCGC CTATGTGGCG GGAACGACCG GCTATGGCGA CGAGCTGCTC
GGCAAGGCGT TTCCGGTCCA GGCCGGCGCG CAGTACCGGG TAACGGGATC AGCCTATTCG
AACGGCAATC AATGGCCGCA GTTACGGATC AAGTGGTTGG ACCGGACCGG CGCTCTGATC
AACTACGTCG ATTTCCTTGT CGGGGATCGC GGGGCCGGGC CGGTCACGGC GACGGTCAAT
CTGACAGCCC CGGCCGGAGC CACGCAGGCG GTGATGGCCG CTTACGTGAT GCGCACCAAC
ACCAACGCTG ATGTCTATGT CGGTGGCTTT GTTGTCCAGA AACGCAATGC GGCCGAGCTG
ATCATTGACG GCACGATCCT TGCCAACATG CTGTCGGCCG GTTCTGTAAC GACGGATAAG
CTCGCGGCCA ATTCTGTTAT TGCCGGTAAG ATTGCCGCTG GTGCCGTCAA CACGGATCAA
CTCGTTGCCG GTGCAGTGAC GACGGCAAAG GTGGCAGCAG GGGCCATCAC CACCAATCTG
CTCGCGGTCG GGCAGGGCGC GAACTTCATC AAGAATTCCG ACTTCTCTGC CGGGATCACC
GGCTGGGGGG TGGAATATGC CAATGCCGAT CTCGGCAATT GGACGATCAG CCTGCGCAAC
GACACCTTTG CTCCTGTACC CGGCGCCCTG GAAATTCGTC AGGTCAATGG GACGCAAGGG
CTTGAGATTG GCGCTACCTA TAAAAAAGAT GGCACAAACA TCGACCTCAT GTCTGTGGAG
GCTGGCAAAT GGTATGAGCT ATCGACCTAT TATTTTGGCC ACCGTTGCAA CGGCCTGCAA
GTGTATATCG CATTTGCGAA CGCGGCTGGT GCGGTCATCT CTCACGGCAC GCCTGGAATC
TGGCCCGCAA ACCACAACAC AGATCCGGGC AAGCAGCTCT CTAACTATCA GCGGGGCTGG
TTTAAAGCGC AAGCTCCTGC CGGTGCAGCG TATGCCTATG TGTTTTTTCG GCATAAAGGC
ACGATCAACG GGCAGGCAGA TAGCTATCTG TGGATTCATA AACCGTTCTT TGGTGAGGCG
ACCGCCAACC AGACGGAACC GACGCCGTGG TCTGCGGCCG GCGTCACGCT GATCCAGAAC
GGCAATATCG TTGCGGGATC GGTGACGACA GACAGCCTAG CGGCAAATTC CGTCGTTGCT
TCCAAGATCT CCGCTGGTGC GATCACCACA CCTGCTCTTG CGGCTGGTTC GGTTGTTGGT
ACCAGTATTG CGGCCTCGAC GATTACCGGT GCCAACATCG CCGCCGAAAC CATCGGTACA
GATAAGCTTG CGGCCAATTC CGTCACCGCC AAGCAGTTGG TGCTGACGGA TTTTACCAAT
CTTGTCCCTG ACAATCAGAT GCAAGACTTC GGAAACTCTT GGGTTGGGGC CAATTGGCAG
TCGTGGACCG ACCCTTACGT CGGCGGCATG GCATCTCGCT CCCAAGCTCG ATACCCATAT
GTTGCCGGGC GCACAGGCTA CAGCGAAGAG CTGTTGGGTA AAACATTCTC AGTGACGCCG
GGGGCGCAAT ATCGCGTCAC AGGGACGGCG CTTTGCCCTT CCGGCAATTA CTCCCCTTTG
CTGCGGATCA AATGGTTGAA CAGTTCTGGT GGGACCATAA GCTATAACGA CTTTGTGGCA
GGCGACAGGT CATCGGGCGT CGTCACGACA ACCATCAACC TGACTGCGCC CGCTGGCGCA
GTTCAGGCTG TGATGGCCGC TTACGTGTGG CGCACTGCGA CCACAGGTGA TGTTTATGTG
GGTGGCTTTG TGGTCAACAA GCGCAACGCC GCCGAGCTGA TCATCGACGG CACGATCACC
GCCGACAAGC TTGCCGTTAA CAGCCTCAGC GCTATCACCG CCAACCTGGG CACGGTGACG
GCAGGCGAGA TCCGCAGCTC GAACGGCAAG ATGGTGATTT CCCTTAACGC AGGCACGATT
GTGATTTCGT CATGA
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| Protein sequence | MPMRHGPNPL AASPSAWRRL PPTMCRASTR GAVIRPLRRI LSNPSKGIPS MAIFSGIAAF
VSGVASALGA VSTFIGGMGV IGSTLLKAAV GVGLNYLASA VAGKSKASTA SFAVNGQLQS
GGTVPRSIIF GMTATAGSLV YANTWGNAGK TPNAYVTQVI ALADAPIKSL LVAVVNGVAC
EIDFDHPHAE YGWPVVDYRK GNTDYLWLKF YDGTQTEADS FLVNRVSSTA RPYENTRVGH
GVAYVIATSR VNQELFSGFP SFKFVLDGMR LYDPSKDSSV GGNGAQRWSD ASTWGGDGDR
LPVVQLYALM RGIRWNGQWL YGLQTVTERR LPASHWIAQI GKCRTLIEGA DGMEATYRSG
AEVQVSAALQ DAAQAMLTAC NGRLAEIGGT YKPFIGVSDE PVMTFADADI LSTEEQSFTP
FFGLSDTVNG ISASYPSPDD SWNMTEAPPL YNGDYEVEDG NRRLLSDVSL DFVPYAGQVQ
RLMQSALKEA RRARRHTISM PPMFGALEPG DIVATSSNRN GYVEKRFRVD GVLDQPNLDV
VLDITEVDPA DYDWNQGSDY KPPVTGSVSS GVPAAQSTTG WSVVAGSVTD SDSQDRRPAI
VVSCTADLDD VARIWVKVRV KATGVVVYDS DAHPYAGAAT WTLSGAWCLA LTEYELQGKL
VPVSSRETVA SDWLSVTTLN LSESTDVLDN SITTAKLADA AVTASKIMDE AVTNLKLADA
AVSTAKLQVA AVTQEVLANN SVIATKLADA AVTGAKLAAQ AVDATKFAAS IEPVRVVTQL
PTSRVSAYVT FNGEAYRWNG AAYVKTVSTA ELTGQLIGSQ IADLAIVASK IADGIITGTK
LAADTIGANN LAANSVTAKQ LVLTDFTNLV PDNQMQDFGS SWSGAGWSSW TDPYLGGMAS
RSQMKFAYVA GTTGYGDELL GKAFPVQAGA QYRVTGSAYS NGNQWPQLRI KWLDRTGALI
NYVDFLVGDR GAGPVTATVN LTAPAGATQA VMAAYVMRTN TNADVYVGGF VVQKRNAAEL
IIDGTILANM LSAGSVTTDK LAANSVIAGK IAAGAVNTDQ LVAGAVTTAK VAAGAITTNL
LAVGQGANFI KNSDFSAGIT GWGVEYANAD LGNWTISLRN DTFAPVPGAL EIRQVNGTQG
LEIGATYKKD GTNIDLMSVE AGKWYELSTY YFGHRCNGLQ VYIAFANAAG AVISHGTPGI
WPANHNTDPG KQLSNYQRGW FKAQAPAGAA YAYVFFRHKG TINGQADSYL WIHKPFFGEA
TANQTEPTPW SAAGVTLIQN GNIVAGSVTT DSLAANSVVA SKISAGAITT PALAAGSVVG
TSIAASTITG ANIAAETIGT DKLAANSVTA KQLVLTDFTN LVPDNQMQDF GNSWVGANWQ
SWTDPYVGGM ASRSQARYPY VAGRTGYSEE LLGKTFSVTP GAQYRVTGTA LCPSGNYSPL
LRIKWLNSSG GTISYNDFVA GDRSSGVVTT TINLTAPAGA VQAVMAAYVW RTATTGDVYV
GGFVVNKRNA AELIIDGTIT ADKLAVNSLS AITANLGTVT AGEIRSSNGK MVISLNAGTI
VISS
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