| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1882 |
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| Symbol | |
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| ID | 7387196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1555565 |
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| End bp | 1556857 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651158 |
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| Product | membrane protein associated metalloendopeptidase |
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| Protein accession | YP_002549355 |
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| Protein GI | 222148398 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA CACGCAGCCG CAAGGGCTTC AGCAAGCGTC AGCGCCAACA GCATGTCCTT
ATCCTCGCAT CCGGGGAAAC CATTCGCCAT ATGACCCTGC GTCCGTGGAT GGCAGGTGCA
GGTCTTTGCC TGGCGGTTGC CGGCGTGGTC GGCTATCTCG GCGCGACCTC CTATCTCATC
ATGCGCGATA ATCTGATCGG TGCCTCCATG GCCCGCCAGG CGCATTTGCA GCACGATTAC
GAAGACCGGA TTTCCGCCTT GCGCGCCCAG GTCGACCGGG TCACGTCCCG GCAATTGCTG
GACCAGCAGG TGGTGGAGGA AAAGCTTCAA ACCCTGCTCG AAAAGCAGAT GGCGCTTTCT
GCCCGTTCCG GCAAGCTTGG ATCGCTTCTG GACCGTGCAG AGGAATCCGG CCTGACGCCG
AATGAGCCTT CAGCGCCTGT GATGCCGGAT AAATCCGCGT CCGTCGCACC TGTGGGTAAG
GGCAATGCAC TGGCCGCCCT GAATCGGATG CTCCATACCG GCCCCGCAGA CACACAGGAA
AGCGATGGCC CGGCATTGGG CTTTATGCCT GCCCATGAAA GCGGCGCCGA CCGGGCCGAC
CGGGTTTTCC GCAACGTGAC CCTGTCGCTG AAATCCATCG AACAACAACA GAAATCAAGC
ATCCATGCAC TGACCGCCGA GGCGAGCGAC AAGGCCAACA CCATCGAGCA GGTCTTGACC
GACAATGGCA TCCGGATCGA CACGCCTGAT GCTGGCAAGG ACGGAATGGG TGGCCCCCTG
GTCGATGCCG ACCCGAAACT CGGAATCGAT ACCAGTCTCG ACGGATTGGA TAGCGCCCTC
AATCGCCTGG ATGCCGCCCG CGAAACGGCA AAGGACATGC CTTTTTCAAA CCCTGCCGCC
ACACGTGAAA TCACCAGCCC GTTCGGCAAC CGCCCTGACC CGCTGCTTGG ACGGCTGGCC
ATGCATACCG GCATAGATTT CCGCGCAACA AATGGTTCTC CCGTCAAAAG TGCCGGTGCT
GGAACCGTCA TTACGGCCGG ACCGACGGGC GGCTATGGGA ATATGGTGGA AATCGATCAT
GGTCAGGGAC TGTCCACCCG TTACGGCCAT ATGTCGAAAA TCCTCGTTCG TCCGGGCGAA
AAAATCGAGG TTGGCCAGTT GATTGGCCTT TCCGGATCGA CCGGGCGCTC CACCGGGCCA
CACCTGCATT ATGAAATTCG CAAGAACGGC AACCCGATCA ATCCGATGAG CTTTCTGGCT
TCCGGAATGA CACTGAAGCC ATTTATTGAG TAA
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| Protein sequence | MMKTRSRKGF SKRQRQQHVL ILASGETIRH MTLRPWMAGA GLCLAVAGVV GYLGATSYLI
MRDNLIGASM ARQAHLQHDY EDRISALRAQ VDRVTSRQLL DQQVVEEKLQ TLLEKQMALS
ARSGKLGSLL DRAEESGLTP NEPSAPVMPD KSASVAPVGK GNALAALNRM LHTGPADTQE
SDGPALGFMP AHESGADRAD RVFRNVTLSL KSIEQQQKSS IHALTAEASD KANTIEQVLT
DNGIRIDTPD AGKDGMGGPL VDADPKLGID TSLDGLDSAL NRLDAARETA KDMPFSNPAA
TREITSPFGN RPDPLLGRLA MHTGIDFRAT NGSPVKSAGA GTVITAGPTG GYGNMVEIDH
GQGLSTRYGH MSKILVRPGE KIEVGQLIGL SGSTGRSTGP HLHYEIRKNG NPINPMSFLA
SGMTLKPFIE
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