| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1810 |
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| Symbol | |
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| ID | 7386782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1508401 |
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| End bp | 1509282 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651103 |
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| Product | tRNA/rRNA metyltransferase |
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| Protein accession | YP_002549303 |
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| Protein GI | 222148346 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG ATAACCCAAA CGACACGTCC GACCGCGACA GCCACTATGC AACTTTGCGC
CGTCAGGTGC GGGATGCAAA GCGTGAGCGC GGCGAGATTC CCACCCCGCA ACCGCAAAAA
CGGCGCAAGT CCAACGCCGA TTGGACACCG CCACCGATCG CCCCCGACCA GGTATTTTTA
TATGGCCTGC ACACGGTGCG CGCCGCCCTC AACAATCCCG AACGCAAGCC GATCAAGCTG
TCACTGACCC AGAATGCGCT GGTACGGCTG GAGATAGGCC CGGTCGATGC CCTGCCCTTT
CCTGTGGAAA TCGTCACGCC GCAGGATCTC GACAAGCATC TGGGGCCGGA AGCCATTCAT
CAGGGCGTCA TGCTGGAGAC CCGGCCACTG CCGCCTCGCC GTCTTGAAGC GCTGAAGGAA
AGCCCGCTGT TGCTGGTGCT CGACCAGGTG ACCGATCCGC ATAATGTCGG GGCAATCATG
CGCACCGCCG TCGCCTTCGG TGCTGGCGCG GTGATCACCA CCATGCGCCA CAGCCCAACC
GAATCGGGTG TACTCGCAAA ATCAGCCTCC GGTGCGCTGG AATTGATCCC TTATATCCAG
ATCACCAATC TCGCCGAGGC GCTGGGCGAA TTGCACAAGC TCGGTTTCGT GTCCATCGGG
CTCGATTCGG AAGGGCCACG CCCGCTGGAA GAGACATTCA GTGGTGACAA GCTGGCGTTG
GTGCTTGGTT CCGAAGGCAA GGGCCTGCGC CAAAAGACCC GTGACACGGT CAACGCACTG
GCGCGGCTCG ACATGCCCGG TGAAATCAAA TCGCTGAACG TGTCAAATGC GGCGGCTATC
GCCCTCTATG CCTCGCGCCA ATTCCTGCTG CGCCAAAGCT AA
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| Protein sequence | MSKDNPNDTS DRDSHYATLR RQVRDAKRER GEIPTPQPQK RRKSNADWTP PPIAPDQVFL
YGLHTVRAAL NNPERKPIKL SLTQNALVRL EIGPVDALPF PVEIVTPQDL DKHLGPEAIH
QGVMLETRPL PPRRLEALKE SPLLLVLDQV TDPHNVGAIM RTAVAFGAGA VITTMRHSPT
ESGVLAKSAS GALELIPYIQ ITNLAEALGE LHKLGFVSIG LDSEGPRPLE ETFSGDKLAL
VLGSEGKGLR QKTRDTVNAL ARLDMPGEIK SLNVSNAAAI ALYASRQFLL RQS
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