| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1675 |
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| Symbol | speB |
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| ID | 7386685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1400082 |
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| End bp | 1401035 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651002 |
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| Product | agmatinase |
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| Protein accession | YP_002549206 |
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| Protein GI | 222148249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGATA AATCCATAGA CCACGCCTTC ACGGCAACCG ATCTCACATC GGCAGCCACC
GACCCGACCT ATGCCGGGGT GCTCTCCTTC ATGCGCAGGC GCTATACCAA ACTGCTGGAT
GGGGTGGACA CCGCGGTCTG GGGCATTCCC TTCGATGCCG CCACCTCCAA CCGGCCAGGC
GCCCGATTCG GGCCACAGGC GATTCGACGT GCCTCAGCCA TTTTCGACAA TGACCCGCAA
TATCCGTTCG AGCGCGACCT GTTCGCGGCC ATGCCCACCG TGGATTACGG CGATTGCCGT
CTGGACTATG GCAACCATTG GGAAACACCA GCGACCATTG AAAAGGAAGC GGCCGATATT
CTCTCAAAGG CGAATTTCCT GCTGACGCTT GGCGGCGACC ATTTCATCAC CTGGCCTCTG
CTGAAGGCCC ATGTCGCCAA ACATGGCCCT CTGGCGCTGG TGCAATTCGA TGCCCATCAG
GACACCTGGT TCGATGACGG AAACCGGATC GACCATGGTT CCTTCGTCGG GCGGGCGGTG
CGCGAGGGCC TGATCGTCCC GTCCCGTTCG ATCCAGATTG GCATCCGCAC CCATGCGCCT
GACGATTGCG GCATCCGCAT GCTCTACGGT CATCAGGTGG AGGAGATGCG CGCTGCCGAG
ATCGCAGCGC TGATCCTCGA ACATACGGCG GGCCAACCCG CTTATCTCAC CTTCGACATC
GATTGCCTCG ACCCTGCTTT TGCCCCCGGC ACCGGCACGC CGGTCGCAGG TGGACCATCC
AGCGCAAAAA TCCTCTCAGT TCTGCAAAAC CTTCATCCGC TCGACATAAG AGGAGCCGAT
ATAGTCGAGG TGGCACCCGC CTATGACCAT GCTGATATCA CTGCCATTGC GGGGGCAACG
GTGGCGATGT ATATGCTGGG TCTGCGCGCT GAACGACTGG CGCGATCTGG TTGA
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| Protein sequence | MADKSIDHAF TATDLTSAAT DPTYAGVLSF MRRRYTKLLD GVDTAVWGIP FDAATSNRPG
ARFGPQAIRR ASAIFDNDPQ YPFERDLFAA MPTVDYGDCR LDYGNHWETP ATIEKEAADI
LSKANFLLTL GGDHFITWPL LKAHVAKHGP LALVQFDAHQ DTWFDDGNRI DHGSFVGRAV
REGLIVPSRS IQIGIRTHAP DDCGIRMLYG HQVEEMRAAE IAALILEHTA GQPAYLTFDI
DCLDPAFAPG TGTPVAGGPS SAKILSVLQN LHPLDIRGAD IVEVAPAYDH ADITAIAGAT
VAMYMLGLRA ERLARSG
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