| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1658 |
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| Symbol | |
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| ID | 7388001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1384843 |
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| End bp | 1385871 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650988 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549192 |
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| Protein GI | 222148235 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.32348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGA ATGTTCCAAA ATCGGTGGCC GCCATGGTTC GCCGCCAAAA AAAATTACAA
AAGGCATTTG TGGATCTGGT TGAGAGTGCC ACGCCGCGCG AAAAGGTCGC GCCGAAACCA
AGAAAGCCCG CCCAGCCGCG CCTTGTTGAA AACACCAGCT TCGGTAGTAA TCCCGGACAT
TTGCGGATGA TGACCTATGT GCCTCCCGGC TTGCCGCCGC GCGCGCCGCT GGTGGTCGTG
CTGCACGGCT GTGGGCAGAC GGCCAAGGAT TTCGATGACG GCAGCGGCTG GAGCCGTCTG
GCGCGTCAGC ATGGTTTCGC GCTGCTTTAC CCCGAACAGC GCAACTCCAA CAATCCGAAT
GGGTGTTTTA ACTGGTTTCG CCCGAGTGCT GTTGCCCGTG ATCGCGGCGA GACTGGCTCG
ATCCGCCAGA TGATTGACAC CATGGTCGAG GCTCATGGCC TCAGCACCGA CAATGTTTTC
ATCATGGGCC TGTCGGCCGG TGGGGCGCTG GCTGCCGCGG CTCTTGCCGC CTATCCCGAT
ATCTTCAAGG CGGGTGCGGT GGTTGCCGGG TTGCCGGTTG GTGGTGCGCG CGATGCAATG
AATGCCTTGA ACATCATGCA TAACGGTGTG GCCAAAGCCC CGGATGAATG GGCGCAACTG
GTCTATCAGG CCGCGCCCGA AGGTCGGGAC TGGCCAAGGA TTTCGATCTG GCAGGGTAGG
GATGACAATG TCGTCCATCA GAAGAATGCC GATGCGCTGG TCATCCAATG GCTTGCCGTG
CATGGCTTGC TGGACGGCAA GGCAAAGCCC GTGGCCTATG GCCGGAACGA CGGCTATGTC
TGGCATGACG AAGACGGTGC GATCAAGGTG GAATATGCCG TAATGGATGG CCTGGGACAT
GGTCTGCCGA TCAAGGCGGG TGAGGGGCAG GCAATGCCCT ATATGCTACC TGGCGACCTG
CATTTGCCAT CCCTACTGGT GGAAAGCTGG GGTCTTGACG GGACAGAAGG CAAACGCAAG
GTCGCGTGA
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| Protein sequence | MRLNVPKSVA AMVRRQKKLQ KAFVDLVESA TPREKVAPKP RKPAQPRLVE NTSFGSNPGH
LRMMTYVPPG LPPRAPLVVV LHGCGQTAKD FDDGSGWSRL ARQHGFALLY PEQRNSNNPN
GCFNWFRPSA VARDRGETGS IRQMIDTMVE AHGLSTDNVF IMGLSAGGAL AAAALAAYPD
IFKAGAVVAG LPVGGARDAM NALNIMHNGV AKAPDEWAQL VYQAAPEGRD WPRISIWQGR
DDNVVHQKNA DALVIQWLAV HGLLDGKAKP VAYGRNDGYV WHDEDGAIKV EYAVMDGLGH
GLPIKAGEGQ AMPYMLPGDL HLPSLLVESW GLDGTEGKRK VA
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