Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1614 |
Symbol | ribc |
ID | 7387409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1353406 |
End bp | 1354020 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650958 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_002549163 |
Protein GI | 222148206 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGATGTTTA CTGGCATTGT CACCGATATC GGCACCGTGG AAGACATCGT GCCTCTGAAG GAAGGCGTAA AGCTTCGCAT CGTCACAGCC TATGATCCTC ATACAATCGA CATGGGCGCT TCCATCGCGC ATTCCGGGAC CTGCCTGACA GTCACCGGTC TGCCAGAGGC GGGCAGCAAT GCGCGGTGGT TTGAAGTGGA AGCCTGGGAA GAAGCCCTGC GGTTGACCAC CATCGGTAGC TGGCAAAAAG GCACGCGCAT CAACCTGGAG CGCTCGTTGA AAATCGGCGA TGAGCTGGGC GGGCATATCG TCTCGGGCCA TGTCGATGGC AAGGCCGAGA TCCTGGCGAT CAAAGCCGAA GGCGATGCGA CCCGCTTCAC TCTGCGGGTG CCTGAGAACC TGGCCCGTTT CGTCGCCCCG AAGGGCTCGG TTGCGCTGGA TGGAACCTCG CTGACCGTCA ATGGTGTCGA GGGTTGCGAC TTCGACATCC TGCTGATCCG CCACACGCTG GAAGTGACCA CCTGGGGCGA CCGGCAGGTC GGCGATTTCG TCAATTTCGA AGTCGATACC ATGGCACGCT ATGCGGCAAG GCTCGCGGAA TTTCCTAAGG CGTAA
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Protein sequence | MMFTGIVTDI GTVEDIVPLK EGVKLRIVTA YDPHTIDMGA SIAHSGTCLT VTGLPEAGSN ARWFEVEAWE EALRLTTIGS WQKGTRINLE RSLKIGDELG GHIVSGHVDG KAEILAIKAE GDATRFTLRV PENLARFVAP KGSVALDGTS LTVNGVEGCD FDILLIRHTL EVTTWGDRQV GDFVNFEVDT MARYAARLAE FPKA
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