Gene Avi_1578 details

Gene Information

• Locus tag: Avi_1578
• ID: 7387382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1318752
• End bp: 1319474
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643650931
• Product: hypothetical protein
• Protein accession: YP_002549136
• Protein GI: 222148179
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0593] ATPase involved in DNA replication initiation

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.175039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGACA TCGACAAGAC AGCGGCCCGA CGCCAAGCAT ATGACGGCAA AACGGGCGAA 
CAATTGCCGC TCGCCTTGGG CCACAGGCCG GCATCGGGCC GTGACGACCT GCTTGTCTCT 
GGCCGGCTGG CGGCTGCCGT GTCTGTTGTC GATGCCTGGC CCAACTGGCC GTCGCCGGTG 
GTGATATTGT CGGGGCCGCA AGGCTCCGGT AAATCGCATC TGGCGGAAAT CTGGCGGACG 
CAAAGTGGGG CTGTTGATAT TCTGCCTCTT TCGGGAGCGG ATGCCTCCAT GACCGCATCC 
AGGGGGGCGG TGCTGTTTGA GGACGCTGAC CGGGCGGATT TCGACGAGGT CGAGTTGTTT 
CATGTTATCA ATAGCGTCAA GCAGCATGGG ACGAGCCTGC TGATCACTTC GCGCACCTGG 
CCTTTGTCCT GGCCGGTTAA GCTTGCGGAC CTGCGTTCCC GGCTGAAGGC CGCGACACTG 
GTTGAAATCG GCGAGCCGGA CGAGGCCTTG CTGTCGCAGG TGATCGTCAA GCTGTTTGCC 
GACCGCCAAT TGGCGATTGA CGAGCGGGTC GTTGATTATA TCGTTCAGCG TATGGAACGG 
TCGCTGGCTG CCGCCCAGGC CGTGGTTGAG CAATTGGACC GGTTGGCACT GGCACGGCGG 
GCAAAAATTT CGCGTGCGCT GGCGGCAGAG GTTCTGGACG CGGTCGTGGC GCACGATCGC 
TAA 

 

Protein sequence

MRDIDKTAAR RQAYDGKTGE QLPLALGHRP ASGRDDLLVS GRLAAAVSVV DAWPNWPSPV 
VILSGPQGSG KSHLAEIWRT QSGAVDILPL SGADASMTAS RGAVLFEDAD RADFDEVELF 
HVINSVKQHG TSLLITSRTW PLSWPVKLAD LRSRLKAATL VEIGEPDEAL LSQVIVKLFA 
DRQLAIDERV VDYIVQRMER SLAAAQAVVE QLDRLALARR AKISRALAAE VLDAVVAHDR