Gene Avi_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1535 
Symbolgmk 
ID7386490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1283782 
End bp1284444 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID643650898 
Productguanylate kinase 
Protein accessionYP_002549103 
Protein GI222148146 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0748909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG CAGCGTCCAA AAACGCCACC ATTCCCAGGC GCGGCCTGAT GCTGGTGATT 
TCCTCACCCT CAGGGGCGGG TAAATCGACC ATTTCACGCA CGCTGATGGA TATCGACAAG 
CAGATCGGCA TGTCGGTCAG CGTCACCACG CGCCAGCGCC GTCCGAGCGA AATCGAGGGC 
GTGCATTACC ACTTCATTTC GCAGCGTGAG TTCGAGCGGC TCAAGGCCTC GGATGCGCTG 
CTGGAATGGG CGGAAGTGCA TGGCAATTTC TATGGTACAC CACGCGAGCC GGTTGAGGTG 
GCGATGTCAG AGGGACGCGA CATGCTGTTC GACATCGACT GGCAGGGCGC CCAGCAATTG 
CAAGAGAAGA TGGCCGCCGA TGTCGTCTCG GTCTTCATCC TGCCGCCGAC CATGACCGAG 
CTGCAATCGC GCCTGCACCG CCGCGCCGAG GATTCCGAAG AGGTGATCCA GACGCGGCTG 
GCCAATTCCC GCTCCGAGAT CGAGCATTGG CGTGAATATG ACTATGTCAT CGTCAATGAC 
GATCTGAATT CGGCCTTCGA TGCTGTGCAG TCAATCGTCA AGGCCGAGCG CCTGCGCCGC 
GACCGCCGCC CGGGCCTGTT CGATTTCGTC AATAACCTGA TTACGGAAGA GCCAAAGCTT 
TAA
 
Protein sequence
MSIAASKNAT IPRRGLMLVI SSPSGAGKST ISRTLMDIDK QIGMSVSVTT RQRRPSEIEG 
VHYHFISQRE FERLKASDAL LEWAEVHGNF YGTPREPVEV AMSEGRDMLF DIDWQGAQQL 
QEKMAADVVS VFILPPTMTE LQSRLHRRAE DSEEVIQTRL ANSRSEIEHW REYDYVIVND 
DLNSAFDAVQ SIVKAERLRR DRRPGLFDFV NNLITEEPKL