Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1515 |
Symbol | dnaB |
ID | 7386476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1268982 |
End bp | 1270478 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650884 |
Product | replicative DNA helicase |
Protein accession | YP_002549089 |
Protein GI | 222148132 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.84588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATG TTGCGCGCAG GTTAAATCCT GCCCAGCCGG CAGAGCCCCA TTACCGGGAA GCCCCGAACA ATATCGAGGC CGAACAGGCT TTGCTTGGCG CCATTCTGGT CAATAACGAT GCCTATTATC GTGTCTCGGA TTTTCTCAAA CCCCCGCATT TTCATGAGGG CCTGCACCGG AAGATCTACG AGGTCGCCTC CGACATTATC CGCATGGGCA AGACCGCCAA TCCGGTGACG ATCAAGACCT TCCTCCCCTC AGACCAGAAG ATCGGCGATT TCACTATTGC CCAATATCTG GCGCGGCTGG CGTCGGAAGC CGTGTCGATC ATCAATGCCG AAGACTATGG CCGGGCGATC TACGATCTGG CCCTACGGCG CGCGCTGATC ACCATCGGCG AAGACATGGT CAATATCGCC TTCGACGCAC CGCTCGACAT GCCGCCGCAG GCGCAGATCG AAGATACCGA GCGCCGTCTG TTCGATCTGG CCGAAAACGG TCGCTATGAC GGCGGTTTCC AGTCCTTCAA CGATGCAGTG GCCCAGGCCG TCGATATGGC CGGTGCCGCG TTTGAGCGCG ATGGTCATTT GTCCGGCATT TCCACCGGCA TCCATTCGCT TGACAGCAAA ATGGGCGGTT TGCAGCGCTC TGACTTGATC GTGCTGGCCG GACGTCCCGG CATGGGTAAG ACCTCGCTTG CCACCAATAT CGCCTGGAAC ATCGCCGCAT CCTATGAGCC GGAAGTGCAG CCGGACGGTT CGTTCAAAGC CAAGAATGGC GGCGTGGTCG GCTTCTATTC GCTCGAAATG TCGTCCGAGC AGCTCGCCAC CCGTATCATG TCGGAGCAGA CCGAAGTGTC GTCTTCGAAA ATCCGCCGTG GTGATATTAC CGAGCAGGAT TTTGAGAAGC TGGTTGGCTT TTCCCAAACC ATGCAGAAAG TACCGCTGTT CATCGACCAG ACCGGTGGTA TTTCCATCGC CCAGCTTTCC GCTCGGGCCC GCCGCCTGAA GCGCCAGCGT GGCCTCGATT GTCTTGTCGT GGACTATATT CAGCTGATGA CTGGCTCGGG CAAGTCAGGG GAAAACCGCG TCCAGGAAAT CACCCAGATC ACCACGGGTT TGAAAGCACT TGGCAAGGAG TTGAACGTGC CAATCGTCGC GCTGTCGCAG CTGTCGCGTC AGGTGGAAAG CCGCGACGAC AAGCGTCCTC AGCTCTCCGA CCTTCGTGAA TCAGGTTCGA TCGAGCAGGA CGCCGACGTG GTGATGTTCG TGTTCCGTGA GGAATATTAT GTGCAGAACC TCGAACCCCG CGATATGGCC GACCCAAAAT ATCCCGAATG GGAAGCCCAG ATGGAGAAGG TGCGCGGCAC GGCGGACGTG ATCATCGCCA AGCAGCGTCA CGGACCAACC GGCACCGTCA AACTGGCCTT CCAGGCGCAG TTTACCCGCT TTGCCGATCT GGCCGATCCG AGCTTCACGC CGTACGAGGA GACCTGA
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Protein sequence | MNDVARRLNP AQPAEPHYRE APNNIEAEQA LLGAILVNND AYYRVSDFLK PPHFHEGLHR KIYEVASDII RMGKTANPVT IKTFLPSDQK IGDFTIAQYL ARLASEAVSI INAEDYGRAI YDLALRRALI TIGEDMVNIA FDAPLDMPPQ AQIEDTERRL FDLAENGRYD GGFQSFNDAV AQAVDMAGAA FERDGHLSGI STGIHSLDSK MGGLQRSDLI VLAGRPGMGK TSLATNIAWN IAASYEPEVQ PDGSFKAKNG GVVGFYSLEM SSEQLATRIM SEQTEVSSSK IRRGDITEQD FEKLVGFSQT MQKVPLFIDQ TGGISIAQLS ARARRLKRQR GLDCLVVDYI QLMTGSGKSG ENRVQEITQI TTGLKALGKE LNVPIVALSQ LSRQVESRDD KRPQLSDLRE SGSIEQDADV VMFVFREEYY VQNLEPRDMA DPKYPEWEAQ MEKVRGTADV IIAKQRHGPT GTVKLAFQAQ FTRFADLADP SFTPYEET
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