Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1476 |
Symbol | |
ID | 7386447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1239112 |
End bp | 1240035 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650855 |
Product | hypothetical protein |
Protein accession | YP_002549060 |
Protein GI | 222148103 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGG TTGCAGCGCC AGTGACTGAG AACCGCGACA GCCTGCGCGG CTTTCTTTTT GCGCTTTCGG CCTATCTGCT CTGGGGATTT CTGCCCCTTT ACATGAAGGC CGTCGCGCAT ATTCCGCCCA TGGAAGTGAT CGCCCATCGG GTGCTGTGGT CCATTCCGGT GGCCGGTCTC GTTCTTCTGG TGCTGCGGCG CACCGATGAC CTGAAGCGAG CACTGCACAA TCCGAAAATG ATTGGCATGG CGGCAATCAC GGCCTGCCTG ATCAGCGTCA ATTGGGGCAT TTATGTCTGG GCCATCGGTG CCGGCCACGC GCTGGATACC GCGCTTGGCT ATTTCATCAA TCCGCTGTTT TCCATTCTAC TTGGTGCCGT GCTGCTCAAG GAAAAACTGA AGCCGGCGCA AATGGCCGCG CTGGCGCTGG TGGTGGTCGC CGTCGTCATC CTGACGGTCG ATGCCGGACG CCTGCCGCTG ATCGCCCTCA GCCTTACTTT TTCCTGGGGC TTCTATGCGT TTTTCCGCAA GACGCTGCCG ATTGGCCCCA ATCAGGGATT TCTGCTGGAA GTGCTGTTAC TTGCACCGTT TGCCCTGGCC TACCTGATCT ATCTCGGCGT GACCGGACAG TCGCATTTCC TGGGGGCGGC GGATGCCAGC ATGTTCAACA ATACCACGCT GCTGGCCTCA AGCGGGTTGG TCACAGCCGT GCCGCTGATC CTTTACGCCA ATGGCGCCAA ACTTCTGCGT CTCTCCACCA TCGGCATCAT GCAATATATC GCCCCGACGA TGATTTTCCT GATCGCCGTC TTCCTGTTTC GCGAGGAATT CAGCACCGCC AAGGCCATTG CCTTCCCGCT GATTTGGGTG GCACTGGTCA TCTATACCTT ACCGATGCTG AAACGGCGCC GATCAGAGCT TTGA
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Protein sequence | MTEVAAPVTE NRDSLRGFLF ALSAYLLWGF LPLYMKAVAH IPPMEVIAHR VLWSIPVAGL VLLVLRRTDD LKRALHNPKM IGMAAITACL ISVNWGIYVW AIGAGHALDT ALGYFINPLF SILLGAVLLK EKLKPAQMAA LALVVVAVVI LTVDAGRLPL IALSLTFSWG FYAFFRKTLP IGPNQGFLLE VLLLAPFALA YLIYLGVTGQ SHFLGAADAS MFNNTTLLAS SGLVTAVPLI LYANGAKLLR LSTIGIMQYI APTMIFLIAV FLFREEFSTA KAIAFPLIWV ALVIYTLPML KRRRSEL
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