Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1219 |
Symbol | |
ID | 7387609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1032854 |
End bp | 1033936 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643650670 |
Product | ABC transporter membrane spanning protein (iron) |
Protein accession | YP_002548876 |
Protein GI | 222147919 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.11373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGATGACTG TTGCCATTGA GAGCGCCGCT GAGGTGCAGG GTGAAGGAAA GGGGCGCAGC CAATATCGCG CGCTGACCGC CCGGCGCGTC ACCATTCTCC TGTGCCTGCT GGCGGCTCTG GCCACAAGCG TTGCCGTTGA TATGGCGCTC GGACCGGCCC GCTACACGCT GTCCCAGGTG CTGTCGGCCA TTTTCATCCC CGATAGCGTC TCCAACCAGA TCCGGGTGGT GATCTGGGAT ATCCGCATGC CGATTGCGCT GATGGCGGTG ACCGTCGGCG CCTGTCTGTC GCTGGCGGGA GCGCAGATGC AGACCATTCT GGCCAATCCG CTGGCAAGCC CGTTTACCCT CGGCATTTCG GCGGCCGCCG GTTTTGGCGC AGCGCTGGCG CTGGTGGGCG GCATCGCGGT GTTTCCGGCC GCCATCGAGT TCATGGTGCC GATCAATGCC TTCCTGATGG CCATGCTCGC TTCGCTGTTC ATCTACGGCG TCTCGACCAT GCGCGGCGTA ACGGTGGAAA CCATCGTGCT GCTGGGCATT GCGCTGGTCT TCACCTTCAA CGCGCTGTTG TCGCTGCTCG AATATCTGGC CTCGGAACAG GCGCTGGCCG CCGTGGTGTT CTGGACCATG GGCAGCCTGA CCAAGGCGAC CTGGATGAAG GTTGGCGTGA CGCTGGCCGT GCTGGTTATC TCGGTGCCGC TGTTTGCGCG CCGCGCCTGG GCGCTGACAG CGCTGCGGCT GGGTGATGAC AAGGCGGCGA GCCTTGGCGT CAATGTCCGG GCGCTCCGGC TGGAAACCAT GATGCTGGTC AGCCTGCTGG CCGCCATTCC GGTGTCCTTT GTCGGCACCA TCGGTTTTGT CGGTCTGGTC GGGCCGCATA TCGCCCGCAT GCTGGTTGGT GAAGACCAGC GGTTCTTCCT GCCCGGCTCT GTCATCTGCG GGGCCTTGCT GCTGTCCGTC ACTTCGGTCG TGTCGAAAAT GCTGATCCCC GGCGCCATTC TCCCCATCGG GGTGATCACC GCGCTGGTCG GCGTTCCCTT CTTCTTCTCG CTGATTTTCA CCAACAGGAG GCGCGCATGG TAA
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Protein sequence | MMTVAIESAA EVQGEGKGRS QYRALTARRV TILLCLLAAL ATSVAVDMAL GPARYTLSQV LSAIFIPDSV SNQIRVVIWD IRMPIALMAV TVGACLSLAG AQMQTILANP LASPFTLGIS AAAGFGAALA LVGGIAVFPA AIEFMVPINA FLMAMLASLF IYGVSTMRGV TVETIVLLGI ALVFTFNALL SLLEYLASEQ ALAAVVFWTM GSLTKATWMK VGVTLAVLVI SVPLFARRAW ALTALRLGDD KAASLGVNVR ALRLETMMLV SLLAAIPVSF VGTIGFVGLV GPHIARMLVG EDQRFFLPGS VICGALLLSV TSVVSKMLIP GAILPIGVIT ALVGVPFFFS LIFTNRRRAW
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