Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0981 |
Symbol | |
ID | 7387081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 829915 |
End bp | 831204 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650489 |
Product | ring hydroxylating dioxygenase alpha-subunit |
Protein accession | YP_002548697 |
Protein GI | 222147740 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.978274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCCGC GCCGGTTGGA AAACGAGGGT ATCATGGATA TTCACAGCAC CGTTCTGCGC CAGCTGAAAA ATCGCCGCGA AGGCTATAGT CTGGAACAGC CCTTCTATAT CGACAAGGAT TACTTCAAGC TCGATATGGA ATTGATCTGG TATCGTGACT GGCTGTTCAT GGGTCATGAT TGCGAAATTC CGAGAGCCGG CAATTATTTT ACCGTGCAGA TCGGTGATTA TCCTGTCGTG GTCGTGCGCG GGCGCGATGG AGTGATCCGT GCTTTCCACA ATACCTGTCG TCACCGCGGC CACCGGGTCT GCACGCAGGA GCGTGGCGCG TCGGCCAAGC TCGTCTGTCC CTATCACCAG TGGACCTATG ATCTGGATGG CTCGCTGGTG TTTGCCCGCC AGATGGGCGA GGATTTTGAC AAGAGCCAGC ATGGCATGAA GCCGGTCGCC TGCGAAAGCT TTGGCGGCTA TATCTTCATC TGTCTGGCAG AGGTGCCGGA GGATTTCGCC AGCTTCCGCG CCACAGCCTT GCCCTATCTT CAGCCGCACC GGCTCAGCGA AGCCAAGATT GCCCATCGCA ACACCATTGT CGAAAAGGGC AATTGGAAGC TAGTTTGGGA AAACAACCGG GAATGCTACC ATTGCGCCGG CAATCACCCG GAACTGTGCC GCACCTATCC GGAAGCACCA AGCGCCACCG GCGTGCAGGG CGCGGGCGAC GATCCTGTGA TTACCGAGCA CTGGCAGCGG TGCGAGGCGG CTAACCTGCC CAGCGCCTTC ACCATGCATC AGAGCGGCCA GTTCCGTGTT GCCCGCATGC CGCTGGTGCA GGATGCTGAA AGCTATACGA TGGACGGCAA GCGGGCCGTC AAGCGTCCGC TGTCGGATGA TGTGACCATC TCCCATATCG GCACGATGCT GATGTTCCAC TACCCGACCA CCTGGAACCA TCTGCTTGGC GACCACGCTA TCACCTTCCG CGTCCTGCCC TTGAGTGCCG AGGAAACCGC CGTCACCACC ACCTGGCTGG TGCATAAGGA TGCGGTGGAA GGCGTGGATT ACAATCTCCA CGACCTCACC CATGTCTGGA ACATGACCAA CGACCAGGAC CGGTCGATTG TCGAGGAAAA TGCCTTCGGC ATCCGCTCTC CCGCTTACGA GCCCGGTCCC TATTCGCCGG ATCATGAGGG CGGCGTCATG CAGTTCATTG AATGGTATGC GAATTTCATG GTTGACCGTC TGGACGGCGA AACCGCCTCG CGGAAATCCC CCCTGTCGGT CGTGGCCTGA
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Protein sequence | MLPRRLENEG IMDIHSTVLR QLKNRREGYS LEQPFYIDKD YFKLDMELIW YRDWLFMGHD CEIPRAGNYF TVQIGDYPVV VVRGRDGVIR AFHNTCRHRG HRVCTQERGA SAKLVCPYHQ WTYDLDGSLV FARQMGEDFD KSQHGMKPVA CESFGGYIFI CLAEVPEDFA SFRATALPYL QPHRLSEAKI AHRNTIVEKG NWKLVWENNR ECYHCAGNHP ELCRTYPEAP SATGVQGAGD DPVITEHWQR CEAANLPSAF TMHQSGQFRV ARMPLVQDAE SYTMDGKRAV KRPLSDDVTI SHIGTMLMFH YPTTWNHLLG DHAITFRVLP LSAEETAVTT TWLVHKDAVE GVDYNLHDLT HVWNMTNDQD RSIVEENAFG IRSPAYEPGP YSPDHEGGVM QFIEWYANFM VDRLDGETAS RKSPLSVVA
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