| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0914 |
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| Symbol | |
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| ID | 7387713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 772230 |
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| End bp | 773651 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650441 |
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| Product | MFS permease |
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| Protein accession | YP_002548649 |
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| Protein GI | 222147692 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.501341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCA TCGTTCCGCT CATCCTGGCC GTGGCCCTGT TCATGGAAAA CATGGACTCC
ACGGTGATTG CGACCGCGCT GCCCGCCATT GCCAACGATC TCGGCGTCGG GCCGATCACG
CTGAAACTGG CTCTGACGTC TTATATGGTG GCGCTTGCCA TTTTCATTCC GGTCAGCGGC
TGGATGGCGG ATAAATTCGG GGCCAAGCAA ATCTTCCGGG CGGCGATTGG GGTTTTTATC
GTCGGGTCCG TTTGCTGCGC GATGTCCGGT TCGCTGGTGG AATTCGTCGC CGCCCGGTTT
TTGCAAGGCA TGGGCGGCGC GATGATGACG CCGGTCGCCC GTTTGGTTCT GCTGCGCACC
AACAAGCGCG AGGATCTGGT CTCGGCCATT GCGCTGCTGA CCATTCCCGG CCTTGTCGGT
CCGCTGGCCG GGCCGCCGGT CGGTGGTTTT ATCACCACCT ATTTCACCTG GCACTGGATT
TTTCTGATCA ATGTGCCGAT CAGCGTGCTG GGTGTCGTCT TGACGACAAT TTTCCTGCCG
GAAATCGAGC GGGTCGAAAC CGCGCCGATC GACTGGACCG GATTTGCCCT GACCTCGCTG
TCGGCGGCGG GCGTCGTTTT CGGCCTGTCG GTCATGAGCC TGCCAGCCTT GCCGCCGATT
GTCGGTACTG CCGCAACTGT TATCGGCCTG TTGTGCGGCG TTCTTTATAT AGTGCATGCC
AGGCGCCATC CTGCACCGCT TCTGGATCTC ACCCTGTTTC GCAAACCGGC CTTTCGCGCC
GCCCAGATCG GTGGGACGCT GTTTCGGATT TCGGCGGGTG CCATTCCCTT TCTGATGCCG
CTGATGCTGC AACTCGGCTT CGGCATGACA CCGTTTGAAT CCGGGCTGAC CACCTTTGTC
GGCGCCATTG GGGCGATCAG CACCAAATTC CTGGCGCGCC GGGTGTTTGC CGCCGCCGGT
TTTCGCAGTG TGTTGATTGT GGCGGGCGTC TGCGGCGCCG CGACCACCTT TCTCAACGCG
TTTTTCACGC CGCAGACCCC GCATGCGCTG CTGATGTTCT TCCTGCTGAT GGCTGGTTTC
TGCCGCTCGT TTTTCTTCAC CGGCACCAAT GCGCTGGGCT ATGCCAATAT CGACAATAAC
GAGGCCAGTC AGGCAACCTC AATTGCCTCG GTGTTGCAAC AGATCAGTCT GGCGCTCGGC
GTTGCTTGCG CGGCCTTCGT TCTGGAGATC AGCACCATGC TGACCGGTGG TCATCTGGAT
CTTGCCGATT TTCATGTGGC CTTTGCCGTC GTGGCGTTTT TGTCGCTGGC CGCGGTCATT
CCCTATATCT TTATGGACAA GAATGCCGGT GCCGATGTGT CCGGCCATCG GCAGCCCTTG
GCAGGTGGGG CCGCCACTGC GGAAAACCTT AGCGCCAAAT AA
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| Protein sequence | MNRIVPLILA VALFMENMDS TVIATALPAI ANDLGVGPIT LKLALTSYMV ALAIFIPVSG
WMADKFGAKQ IFRAAIGVFI VGSVCCAMSG SLVEFVAARF LQGMGGAMMT PVARLVLLRT
NKREDLVSAI ALLTIPGLVG PLAGPPVGGF ITTYFTWHWI FLINVPISVL GVVLTTIFLP
EIERVETAPI DWTGFALTSL SAAGVVFGLS VMSLPALPPI VGTAATVIGL LCGVLYIVHA
RRHPAPLLDL TLFRKPAFRA AQIGGTLFRI SAGAIPFLMP LMLQLGFGMT PFESGLTTFV
GAIGAISTKF LARRVFAAAG FRSVLIVAGV CGAATTFLNA FFTPQTPHAL LMFFLLMAGF
CRSFFFTGTN ALGYANIDNN EASQATSIAS VLQQISLALG VACAAFVLEI STMLTGGHLD
LADFHVAFAV VAFLSLAAVI PYIFMDKNAG ADVSGHRQPL AGGAATAENL SAK
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