Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0743 |
Symbol | |
ID | 7386250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 636552 |
End bp | 637121 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650321 |
Product | hypothetical protein |
Protein accession | YP_002548531 |
Protein GI | 222147574 |
COG category | [S] Function unknown |
COG ID | [COG3334] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.634607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATCAA CAGCCTCCCT CGCAAACTAT GCCGCTTCAA GATATTCTGG TCTTGGCGCT CTGGCCCTGG CCTGCGCTGT TCTTGCTGTT TCGGCCCTGC CAGGCAGCGC CCAGCAGGCG GCTCCGGCGC GTGCCGCCAA TAGCGGCTCC ACCGGCACGA CCAGCGCCGA TGATATCCAG CGTTTTTGCA CCAACATTGC CGATCCGGCC CGCGACCAGC GCTATCTGCT GCAAAAGCAG GATCTGGAAA AACTGCAATC GGATGTCAAT GACCGCATTG CCGTGCTGGA AGCGCGCAAG AGCGAATATC AGGACTGGTT GGCGCGCCGA AACGAGTTTC TGCAAAAGGC AGAAGCCGGT TTGACCGATG TCTACAAGAA TATGAAGCCC GATGCCGCTG CCCCGCAGCT GGAGAAGGTC AATCCTCTCT TGGCCGCAGC GATCATCATG AAGCTTCCGG CCAAGCAATC CAGTTTGATT CTCAGCGAGA TGGACCCCGA AAAAGCCGCG CTCGTCGCTG GCATCATGTC CAATGCCGCT GATCCCAATA CCTCGAAGGA ACCCACATGA
|
Protein sequence | MRSTASLANY AASRYSGLGA LALACAVLAV SALPGSAQQA APARAANSGS TGTTSADDIQ RFCTNIADPA RDQRYLLQKQ DLEKLQSDVN DRIAVLEARK SEYQDWLARR NEFLQKAEAG LTDVYKNMKP DAAAPQLEKV NPLLAAAIIM KLPAKQSSLI LSEMDPEKAA LVAGIMSNAA DPNTSKEPT
|
| |