Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0692 |
Symbol | |
ID | 7388723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 593930 |
End bp | 594283 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650286 |
Product | transposase |
Protein accession | YP_002548496 |
Protein GI | 222147539 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTTC CATCGAACCG CGTGCGGATC ATGGTGGCCA CCAAACCGGT AGATTTCCGG AAAGGGCATG ACGGCTTAGC GGCGCTGGTG AAGAACGAGC TGCACAAGGA CCCGTTCACC GGAACGATCT TCGTGTTCAG GTCACGCAAG GCGGACCGAC TGAAGCTGAT CTACTGGGAT GGGAGCGGGA TCGTGCTGGC GTATAAGAGG CTGGAAGAGC ACACGTTCAC TTGGCCTGGC ATCAAGGATG GCCTGATGAC GCTGAGCCAT GCCCAGTTTG AAGCCCTGTT TGCTGGCCTG GATTGGCGGC GGGTTCATGC CGTGCAGACG AGAACGCCAG AGACCGTCGA ATAG
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Protein sequence | MIFPSNRVRI MVATKPVDFR KGHDGLAALV KNELHKDPFT GTIFVFRSRK ADRLKLIYWD GSGIVLAYKR LEEHTFTWPG IKDGLMTLSH AQFEALFAGL DWRRVHAVQT RTPETVE
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