| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0584 |
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| Symbol | |
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| ID | 7388978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 501085 |
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| End bp | 501732 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650206 |
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| Product | two component response regulator |
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| Protein accession | YP_002548418 |
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| Protein GI | 222147461 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.566414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGC AAACAATCAT TATCGCGGAC GATCATCCCT TGTTTCGCGG CGCGCTCCGG
CAAGCCGTGA GCGGCATGGA TGGCAGGCAG GACATTGTCG AAGCTGGCGA TTTCGAGGCG
GCCCGACTGG CGGCGGATCA GCATCCGGAT GCCGATGTCC TGCTGCTTGA TCTGGCCATG
CCAGGCGTCA GCGGCTTTTC CGGCCTGATG GCCTTGCGTG CGGAGTTTTC CAGCCTGCCG
ATCATTATCT GTTCGGCCAC CGACGATTGC GCCACGATCC GCCGCTCGCT GGAGCTTGGC
GCTTCCGGTT TCATTTCCAA ATCCTCTGGC ATCGATGACA TTCGCTCCGC GATCCAGACC
GTGCTGAACG GCGATATCTT CACGCCTTCA TCCTATGTCG AGGATCAGGA ACAGGACCCT
GAGCTGGCCG ATATCATGGC ACGGCTGCGC ACACTGACCC CTCAGCAGAA CCGGGTGCTC
GGCATGTTGT GCGAAGGCTT GCTGAACAAG CAGATCGCCT ATGAACTCAG CGTTTCGGAA
GCCACGATCA AGGCGCATGT CTCCGCCATT CTGCTCAAGC TCAAGGTCGA TAGCCGAACC
CAGGCGGTCA TCCAACTGGG GCGGCTCAAT ATGGCCATGG TCGCTTGA
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| Protein sequence | MAEQTIIIAD DHPLFRGALR QAVSGMDGRQ DIVEAGDFEA ARLAADQHPD ADVLLLDLAM
PGVSGFSGLM ALRAEFSSLP IIICSATDDC ATIRRSLELG ASGFISKSSG IDDIRSAIQT
VLNGDIFTPS SYVEDQEQDP ELADIMARLR TLTPQQNRVL GMLCEGLLNK QIAYELSVSE
ATIKAHVSAI LLKLKVDSRT QAVIQLGRLN MAMVA
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