Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0556 |
Symbol | attY |
ID | 7388962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 474389 |
End bp | 474898 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650191 |
Product | glutathione S-transferase |
Protein accession | YP_002548403 |
Protein GI | 222147446 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTGG ACGATGGTGA TATTCTGACA GAGGGCAATG TCATTCTCAC CCACATCGCC GACCAGGTTC CCGAAAAGGG TTTGCTGGCG CGGCCGGGTG AAAGACAGCG CGAAAGGCAG ATGGAATGGC TGAATTTCAT TGCAGCTGAA ATTCACAAGA ATTTTATTAC CCGTGAGCGC CACGGCGGCG TTGCCGCGAA CTTCCTTTCC AAGACAGAGG AAGGACAGGC CGATACACGG GTGTTTGTCT CACCACGCCT TGCCTATGTT GATCAGTGGC TTGAGGGGCG CCGCTTCCTG CTTGGAGACA ACCTATCCGC GCCGGATGCA TACCTGTATG TGATGACAAC CTGGGCTCGT CGGCTTGGAT TTGATCTGAG TGTCTGGCCA AACCTTCAGG CCTTTTCCAC CCGCGTTTCT CAAATCGACT CGGTTGTTCG CACAGCGGAG GTGGAAGGCC CACCACACTC GCTGCGCCCA GCCCTGCCGC AGGTGGCTGC TGCTGAATAA
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Protein sequence | MRLDDGDILT EGNVILTHIA DQVPEKGLLA RPGERQRERQ MEWLNFIAAE IHKNFITRER HGGVAANFLS KTEEGQADTR VFVSPRLAYV DQWLEGRRFL LGDNLSAPDA YLYVMTTWAR RLGFDLSVWP NLQAFSTRVS QIDSVVRTAE VEGPPHSLRP ALPQVAAAE
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