| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0488 |
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| Symbol | phoU |
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| ID | 7388486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 411394 |
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| End bp | 412101 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650131 |
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| Product | phosphate transport system regulatory protein PhoU |
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| Protein accession | YP_002548345 |
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| Protein GI | 222147388 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.18906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGC ATATCTACAC CGCCTTTGAC GAGGAACTGA AATATCTAAT GCGCCGCATT
TCGGAAATGG GCGGTCTGGC CGAGCAGATG GTGGGTGAAT CCGTTCGCGC GCTGGTCAAT
TCCGATGCCG CCCTCGCCCA GAAGGTGATC TCCGACGACG TGATCATGGA CAATGCCGAG
CGCGAAGTGG GTGACAAAGC GATCGTCACC ATCGCAAAAC GTCAGCCCAT GGCCGCCGAT
CTGCGCGAAA TCATCGGTGC GCTCAGGATT GCCTCGGATC TGGAGCGCGT CGGCGATCTC
GGTAAGAACA ATGCCAAGCG GGTCATGGCC GTGCAAGGCA CCGGCGTGCC GCGCAAGCTG
GCCCGCGGCA TCGAGCATCT TTCGGAACTG GCGATGACCC AGCTCAAGGA AGTGCTGGAT
GTCTACACCA CCCGCTCGGC GGAAAAGGCC AAGTCGATCC GCGACCGCGA TGAGGAGATC
GATGCAATCT ACACCTCGCT GTTTCGCGAA TTGCTGACCT ATATGATGGA AGATCCGCGC
AACATCACCA CCTGCACGCA CCTTCTGTTC TGCGCCAAGA ATATCGAGCG CATCGGCGAC
CATGCCACCA ATATCGCCGA GACCATCTAT TACATGGCCA CTGGCGCACA GCCCGAGGGT
GAGCGCCCGA AGGACGACAC GACGACCGCT TTCGGGGTCG CCGATTGA
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| Protein sequence | MTAHIYTAFD EELKYLMRRI SEMGGLAEQM VGESVRALVN SDAALAQKVI SDDVIMDNAE
REVGDKAIVT IAKRQPMAAD LREIIGALRI ASDLERVGDL GKNNAKRVMA VQGTGVPRKL
ARGIEHLSEL AMTQLKEVLD VYTTRSAEKA KSIRDRDEEI DAIYTSLFRE LLTYMMEDPR
NITTCTHLLF CAKNIERIGD HATNIAETIY YMATGAQPEG ERPKDDTTTA FGVAD
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