| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0442 |
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| Symbol | lnt |
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| ID | 7388453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 376377 |
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| End bp | 377963 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650097 |
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| Product | apolipoprotein N-acyltransferase |
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| Protein accession | YP_002548312 |
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| Protein GI | 222147355 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
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| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0171803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGGT TGGCGGCAAG GATCATGCTT CTGGCGGGAT GGCGGCGTGC CCTTCTTGCC
ATTGCCTCAG GCGCGGTCGG GGCGCTGGCG TTGCCGCCGG TAGGGTTCTT TGCGGCTCTG
TTTTTCTCCT TCTCCATGCT TGTCTGGCTG CTCGATGGTG TGAGCGGCAA TCCCGATAGG
AGCTGGTCGC GGGGACTGCG GTCCGCCTTC TGGATCGGTT GGCTGTTCGG CTTCGGTTAT
TTCGTGGCCG GGCTCTGGTG GTTGGGCAAT GCGCTGATGG TGGAGGCCGA CGAATTTGCC
TGGGCACTGC CGCTCGCGGT GCTCGGCCTG CCGGCGGTGT TGGCGGTGTT TTATGGCTTG
GCCTGCCTTG CCGCCCGTCT GCTCTGGTCC GAAGGCCTTG GCCGGATTGC CGCGCTGGCG
GCGATGTTTG GCATCACCGA ATGGCTGCGC AGCTTTATTG CCACGGGCTT TCCCTGGAAT
GCCATCGGCT ATGGCGCCAT GCCCATCCCA TTGATGATGC AATCGGCTGC GGTGCTGGGT
CTTTTCGGGG TTTCGGCCCT TGCCGTCTTC GTCTTTGCCG CCCCGGCTCT TCTGGGAACC
CGCCGTGGGG CAAAGCTCGG GCTGGCGTTG GCCGGAATAT TGTTCTGCGG CCATCTCGGC
TATGGCGCTT ACCGGCTGTC TCTGCCGGAG CCGGACGGAC GGAAGGTGAC AGTGCGTCTG
GTCCAGCCGA ATATAGACCA GGCAGCGAAG ATGGACGATA CCGACCGCGT TGCGATTTTC
GAGAAACATC TTCGCCTGAC AGCGGTGCCG ACACCGGCCG ATCAGCCACG CCCGGATGTG
ATTGTCTGGC CGGAAACCAC CATTCCCTTC ATCCTCACCG AAAATCCAGA CGCCTTGCGG
CAGATTGCCG GGGCGTTGCA GGAGGGCCAA GTGCTGATCA CCGGCACAGT CCGTTCGGAA
GATCAGGGTG CCGGAATTGC CCCGCGCTAT TATAATTCGA TCTATGCAAT CGACAGTCAG
GGGCAGATCC TTGCCGCCGC CGACAAGGTC CATCTTGTGC CATTTGGGGA ATATGTCCCA
TGGCAGGACA TCCTGTCAAA GCTCGGTATT ACCAACATTA TCGACCTGCC GGGAGGCTTT
TCTCAGGGTG CATCACGGTC CCTGATGACC CTTCCGGGGG GACTGAAGCT CTATCCGTTG
ATCTGTTACG AGGTCATTTT TCCTGACGAA ATGGTTAAGG GATTATCCGG GGCCAATGCC
ATAATCAATG TCACCAACGA TGCCTGGTTT GGAGATACGC CAGGTCCATT TCAGCATTTT
CAACAGGCAA GATTACGCGC CGTCGAGACT GGGCTGCCAA TTATTCGCGC CGCCAATAAT
GGCATTTCTG CCTTAATTGA CGGACGGGGA CGCGTGTTTT CGGGTTTGCG ATTGAACGCT
GAAGGCGTGG AAAATGCAAC TTTTACGCTA TCAGCTGCGC CTGAAACCAA TGTAAATCAT
AATAAATGCA ACTTTTGGGC GGTAACTGCT TTGTTATTAT CTGCGGCTGT AATTTCTCGT
TTAGGTTTAA TATCGAGAGT GAATTGA
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| Protein sequence | MERLAARIML LAGWRRALLA IASGAVGALA LPPVGFFAAL FFSFSMLVWL LDGVSGNPDR
SWSRGLRSAF WIGWLFGFGY FVAGLWWLGN ALMVEADEFA WALPLAVLGL PAVLAVFYGL
ACLAARLLWS EGLGRIAALA AMFGITEWLR SFIATGFPWN AIGYGAMPIP LMMQSAAVLG
LFGVSALAVF VFAAPALLGT RRGAKLGLAL AGILFCGHLG YGAYRLSLPE PDGRKVTVRL
VQPNIDQAAK MDDTDRVAIF EKHLRLTAVP TPADQPRPDV IVWPETTIPF ILTENPDALR
QIAGALQEGQ VLITGTVRSE DQGAGIAPRY YNSIYAIDSQ GQILAAADKV HLVPFGEYVP
WQDILSKLGI TNIIDLPGGF SQGASRSLMT LPGGLKLYPL ICYEVIFPDE MVKGLSGANA
IINVTNDAWF GDTPGPFQHF QQARLRAVET GLPIIRAANN GISALIDGRG RVFSGLRLNA
EGVENATFTL SAAPETNVNH NKCNFWAVTA LLLSAAVISR LGLISRVN
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