Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0341 |
Symbol | |
ID | 7387790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 294096 |
End bp | 294788 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650016 |
Product | glutathione S-transferase |
Protein accession | YP_002548231 |
Protein GI | 222147274 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.575191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACTT TGTATCACCA TCCGATGTCA ACCACGTCCC GCTTTGTCCG ATTGATCCTG TCGGAATACG GTTTTCAGGC AGATCTGGTC GAAGAACAGA CCTGGGAAAA GCGCCGGGAA TTTCTCACCC TCAATCCCGC CGGCACCCTG CCCGTCTATG TCGATGACAA TATGCGTACG CTCTGTGGCT GCACGGTCAT ATCGGAATTC CTGGACGAAA CCCATGGCGT GTTGAAGAGG GACCGTCGGC TTTTGGCCGA AGACCCCTTC CAGCGCGCCG AAATCCGACG GCTGGTGGAC TGGTTCCTGC AAAAGATGGA ACAGGACGTC ACCCGGCCAC TGGCCCGTGA GCGGGTATTC AAATTGCAGA TCCCCAACGG GCTTGGTGGC GGCGCACCGG ATTCCAAGGT GCTGCGCACC GCCCGTGGCA ATATTCGCCA GCACATGAAA TATCTGAGCT GGCTGGCTGG CTCGCGCACC TGGCTGGCGG GTGACCGGCT CAGCTATGGC GATCTTGCTG CCGGTGCGGC GATATCGGTG CTGGATTACC TTGGCGAGAT CGACTGGGCG GAATCACCGA TTGCCAAGGA CTGGTATCAG CGGCTGAAAT CGCGCCCGTC GTTCCGACCG CTGCTGGCCG AGCGGGTGCG TGGCCTCACC CCTGTTTCCC ACTATGCGGA TCTGGATTTC TGA
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Protein sequence | MPTLYHHPMS TTSRFVRLIL SEYGFQADLV EEQTWEKRRE FLTLNPAGTL PVYVDDNMRT LCGCTVISEF LDETHGVLKR DRRLLAEDPF QRAEIRRLVD WFLQKMEQDV TRPLARERVF KLQIPNGLGG GAPDSKVLRT ARGNIRQHMK YLSWLAGSRT WLAGDRLSYG DLAAGAAISV LDYLGEIDWA ESPIAKDWYQ RLKSRPSFRP LLAERVRGLT PVSHYADLDF
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