| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0340 |
|---|
| Symbol | |
|---|
| ID | 7387789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 292912 |
|---|
| End bp | 294084 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643650015 |
|---|
| Product | iron-sulfur cluster binding protein |
|---|
| Protein accession | YP_002548230 |
|---|
| Protein GI | 222147273 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG AAGGCAGCCC GGAGCGGACG GCAGAAAAGG CCAAGGCGCG GGCCGCAAAG
CTTTCCGCCT TTATCCGCCA GGAAGCAGCG GACAAGGGTT TTGACCTCTG TCGGATCACC
GGGCCGCAGA GCATTCCCCA GGCACCTGCC CGGCTGATGG AGTTCGTGGA CGCTGGCTAT
CACGGGACCA TGGCCTGGAT GGAGGAAACG CGCGAGCGGC GCGGCGATCC GAAAGTGCTG
TGGCCGCAGG TCCGCTCCAT CGTGATGTTC GGCCTGAATT ACGGCCCTGA GACCGATCCG
CGCGCTCTAC AGGCGCAGCC CAACAAGGCG GCGATTTCCG TCTACGCCCG CAACCGTGAT
TATCACGACA TCATCAAGGG CAAGCTGAAG GAAATCGCCA CCCGCTTTGC CGCCCGGGCC
GGTGAGGATG TAAAAGTCTT TGTCGATACC GCCCCTGTCA TGGAAAAGCC GCTGGCCGCT
GCTGCCGGGC TTGGCTGGCA GGGCAAGCAT ACCAATCTGG TCAGCCGCGA TTACGGCTCC
TGGCTGTTTC TCGGCAGTCT GTTCACCACG GCCGAGTTGG AACTGGACGC AGCGGAGCGC
GACCATTGCG GCTCCTGCCG CGCCTGTCTC GACGCCTGCC CGACAGCAGC CTTTCCGGCC
CCCTACCAGA TCGATGCCCG CCGCTGCATC TCTTATCTCA CCATCGAGCA TAAGGGCGTG
ATCGATCGCG ATCTGCGCCC GGCTTTCGGC AACCGGATCT ATGGCTGCGA CGATTGTCTG
GCCGCCTGTC CCTGGAACAA GTTCGCAGCG CAGACGCGGG AGATCAAGCT TCAGGCCCGC
GAAGACCTGA TGGCACCTGA CATCGCCTTT TTCCTCACCC TTGACGATCC AGGCTTCCGC
AGCCATTTCA GTGGCTCGCC GGTCAAGCGG ATCGGACGTG ACAGGTTTGT GCGCAATGTG
CTGATCGCGG CTGGCAATTC GGGACTGTCA ACGCTGATCA CGCCCTGCCT GGACCTGCTC
GCCGATGCCT CACCGGATGT GCGTGGCATG GCAGTCTGGG CGTTATCGCG CCTGATGGAG
CCGCAAGCCT TTGGCGCTCT CGCACATTAT AGAGAGAATG AGCCTGATAG CGATGTCAGG
GCGGAATGGA TAGCAGCCGG AGTGACCCCA TGA
|
|---|
| Protein sequence | MAKEGSPERT AEKAKARAAK LSAFIRQEAA DKGFDLCRIT GPQSIPQAPA RLMEFVDAGY
HGTMAWMEET RERRGDPKVL WPQVRSIVMF GLNYGPETDP RALQAQPNKA AISVYARNRD
YHDIIKGKLK EIATRFAARA GEDVKVFVDT APVMEKPLAA AAGLGWQGKH TNLVSRDYGS
WLFLGSLFTT AELELDAAER DHCGSCRACL DACPTAAFPA PYQIDARRCI SYLTIEHKGV
IDRDLRPAFG NRIYGCDDCL AACPWNKFAA QTREIKLQAR EDLMAPDIAF FLTLDDPGFR
SHFSGSPVKR IGRDRFVRNV LIAAGNSGLS TLITPCLDLL ADASPDVRGM AVWALSRLME
PQAFGALAHY RENEPDSDVR AEWIAAGVTP
|
|---|
| |