| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0259 |
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| Symbol | |
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| ID | 7387564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 226230 |
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| End bp | 227360 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649954 |
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| Product | ABC transporter membrane spanning protein (sugar/ribonucleotide) |
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| Protein accession | YP_002548169 |
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| Protein GI | 222147212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCG CTTCCATTCC GCTGCCGAAC TGGATCACCT ACGGGCTTTT GCCGGTAATC
AACCTGCTCT TGGCTTTTTT GATTTCCGGC TTGGTCGTGT GGATCATCGG TGAAAATCCC
TGGGACGCGC TGGTCCTCAT GCTTCAAGGC GCGTTGGGTC GCGGTGAAGG CATTGGCTTT
ACGCTCTATT ATGCCACCAA TTTCATCTTT ACCGGCCTGT CGGTTGCTGT TGCCTATCAT
GCAGGACTGT TCAATATCGG CTCCGAAGGT CAGGCCTATG TCGGTGGTCT CGGGGCGGCC
CTGGTGGCCT TGGCATTGGA CCGTTATTGT CCCTGGTATG TCACCATGCC GTTTGCAGTG
ATCGGGGCTG CCTTGTTTGG GGCTGCCTGG GCATTGATCC CTGCTTGGTT GCAGGCAAAG
CGCGGCAGCC ATATCGTTAT CACCACCATC ATGTTCAACT TCATCGGCGC GGCGCTGATG
GTGTATCTGC TGGTGCATGT GCTGATCGTG CCGGGCAAGA TGGCGCCGGA AACCCGAACC
TTTCTGGAGG GCGGACAATT GCCGAAGCTG GATTGGTTGA TGGCGCTGTT TGGCCTGAAG
CTCGGCCCGG CACCCTTCAA CGTCTCCTTC ATCATCGCCC TGGTCATGGC TTTCGCCGTC
TGGGTGCTGA TCTGGCGCAC CAAGCTTGGC TATGAAATGC GCACGCTGGG CATCAGCCGG
TCTGCGGCCG CCTATGCGGG CATTCCCTAT GTGAAGATCG TTATCATCAC CATGCTGATA
TCAGGCGGCC TGGCCGGTAT GATGTCGCTG AATACGGTGA TGGGCGCTTC CGCTCGCCTC
CAGGTGGAAT TCGTCGGCGG CGCGGGCTTT GTCGGCATTG CCGTCAGCCT GATGGGCCGT
AGCCATCCGC TCGGCATCGT TATCGCTGCT ATCCTGTTCG GCGTGCTCTA CCAGGGCGGC
GCGGAACTGT CCTTCGATAT GCCCAATATT ACTCGCGATA TGATCGTCGT CATCCAGGGT
CTGGTGATCC TGTTTGCTGG CGCGTTGGAA TTCATGTTCC GACCGGCGCT GGTGCGTTTC
TATCAGACGA TTGCCCGCCC GGCTGCCCGC CCAGCCACAT CTAGCAAGTG A
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| Protein sequence | MSTASIPLPN WITYGLLPVI NLLLAFLISG LVVWIIGENP WDALVLMLQG ALGRGEGIGF
TLYYATNFIF TGLSVAVAYH AGLFNIGSEG QAYVGGLGAA LVALALDRYC PWYVTMPFAV
IGAALFGAAW ALIPAWLQAK RGSHIVITTI MFNFIGAALM VYLLVHVLIV PGKMAPETRT
FLEGGQLPKL DWLMALFGLK LGPAPFNVSF IIALVMAFAV WVLIWRTKLG YEMRTLGISR
SAAAYAGIPY VKIVIITMLI SGGLAGMMSL NTVMGASARL QVEFVGGAGF VGIAVSLMGR
SHPLGIVIAA ILFGVLYQGG AELSFDMPNI TRDMIVVIQG LVILFAGALE FMFRPALVRF
YQTIARPAAR PATSSK
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