| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0238 |
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| Symbol | |
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| ID | 7387549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 207998 |
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| End bp | 209788 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649938 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002548154 |
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| Protein GI | 222147197 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGACA CCATCAAGAC CTCCCTGCCA GAATCGTCGG AAAGCATCAC CGCCGTTCTC
AAGCGGGTCA TCGCCGAAAA CGGCCGCGAT CATGTGCGCG GCTATGTCTT CGCCATTATC
TGTCTGGCAA CCGTAGCGCT GACAACGGCC TTTACCGCCT GGATCATGGA AACGGTGATT
AACGAGGCCT TTGCCAACAA GCGCGCCGAT CTGGTCTGGA TCATCTGCGT CTCGATCTTC
ATCGCTTTCT CGCTGCGTGG CCTTGCCAGC TATGGCCAGG CGGTGGCTTT GTCCAAGATC
GGCAATAATA TTGTCGCCCG CTATCAGAAG CGGTTGTTCA GCCATCTGAT GACGCTGTCC
ATGGGCTATT TCAACGAGGC CCGCTCGGCG CATCTGGCCG CCCAGGTCAG CCAGAATGTC
AATGGTATCA GAGATGTCCT GAACCTGACC GTCACCTCGA CGGCGCGCGA TCTTCTCAGC
CTGATCGGCT TGATCGCCGT CATGCTCGCC AAGGACTGGG TGCTGACGCT GATCGTTTTC
GTGGTTGCGC CGCCGGTTCT CTATTCGCTA CGCTATATTT CCAAGCGGCT GCGCAAGGCG
ACCACGGATT CCGTCATGCT CAACAGCCGG GTGCTGGGTG CCATGCAGGA AAGCGTCCAG
GGCATTGCCG TCGTCAAGGC CTTCACCATG GAGGAAGAGC TTGGCCGTAA GGTGGAGGGC
ATTATCGACA GTGCCGAAAG CCGCGCCAAC CGCATTGCCC GTCTGAGTGA GCGCACCTCG
CCGATTACCG AGAGCTTTGC CGGTCTCGCC ATTGCCGCCG TCATTGCCTA TGCCTCCTAC
CGCACCATTG CCGGTGGCAT GTTGCCGGGA GCCTTCTTCT CCTTCATCGC CGCCCTGCTG
ATGGCCTATG AGCCTGCCAA GCGGCTGGCG AAATTGCAGA TCCAGATGGA ACGGGCCGTG
GTCAATGCCC GGATGATCTA TGCCATCCTC GACACCCAGC CGCACCAGCG CGACAAGCCC
GGCGCTGGCG AATTGAAGGT CAGCGAAGCC CGTATCGAGT TCAAAGACAT TCATTTTGCC
TATGGCAACG GCCCTGAAAT TCTGAAGGGC GTCGATATCA CTGCCGAAGG CGGCAAGACC
ACGGCACTGG TCGGGCCATC GGGCGCTGGA AAATCCACCA TCATCACGCT GATCCCGCGC
TTCTACGATC CGCCGCGGGG CCAGATCCTG ATCGACGGGC AGGATATTGC CGATGTGACC
AAGGCCTCGT TGCGCAAGCA TATCGCCTAT GTATCGCAGC ATCCCTATCT GTTCGAAGGC
ACGATCCGCG ACAATATCCG CTATGGCCGC CCTGATGCCA ACGATGCCGA AGTGGAAGAG
GCAGCGCGCC TTGCCCATGC GCATGATTTC ATCCTGGCGC AGCCCTATGG CTATGAAACA
CCGGTGGGCG AAAATGGCCT GACGCTGTCT GGCGGTCAGC GCCAGCGCCT GTCGATTGCC
CGCGCTCTGG TGCGCAACGC GCCGATCCTG CTTCTGGACG AAGCCACGTC CGCTCTCGAT
ACCGAATCGG AAGCCGCCGT GCAGAAGGCA TTGGACGAAG CCATGAACGG GCGGACCGTC
GTGGTCATCG CGCACAGGCT GTCCACCGTG GTCAAGGCCG ACAAGATCGT CGTGATGCAA
GATGGCCGGG TGGTCGAAAT GGGCAACCAC AGGACACTGA CGGAAAGGCC GGAGGGGCTT
TACGCCCGGC TGAACAATAT GCAGGCAACC AATGGAAGTC CTTCACTGTA A
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| Protein sequence | MRDTIKTSLP ESSESITAVL KRVIAENGRD HVRGYVFAII CLATVALTTA FTAWIMETVI
NEAFANKRAD LVWIICVSIF IAFSLRGLAS YGQAVALSKI GNNIVARYQK RLFSHLMTLS
MGYFNEARSA HLAAQVSQNV NGIRDVLNLT VTSTARDLLS LIGLIAVMLA KDWVLTLIVF
VVAPPVLYSL RYISKRLRKA TTDSVMLNSR VLGAMQESVQ GIAVVKAFTM EEELGRKVEG
IIDSAESRAN RIARLSERTS PITESFAGLA IAAVIAYASY RTIAGGMLPG AFFSFIAALL
MAYEPAKRLA KLQIQMERAV VNARMIYAIL DTQPHQRDKP GAGELKVSEA RIEFKDIHFA
YGNGPEILKG VDITAEGGKT TALVGPSGAG KSTIITLIPR FYDPPRGQIL IDGQDIADVT
KASLRKHIAY VSQHPYLFEG TIRDNIRYGR PDANDAEVEE AARLAHAHDF ILAQPYGYET
PVGENGLTLS GGQRQRLSIA RALVRNAPIL LLDEATSALD TESEAAVQKA LDEAMNGRTV
VVIAHRLSTV VKADKIVVMQ DGRVVEMGNH RTLTERPEGL YARLNNMQAT NGSPSL
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